Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   		5  
 5'  3'   		6  
 5'  3'   		7  
 5'  3'   		8  
 5'  3'   		9  
 5'  3'   		10  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TTTGTTTTATACACAGAATTATATgtaagtgaagctctgattctgattctacacattgcttgaaccatatgctatatgaatacccaagcagagtcctgaattttttcctttttccaatgagtgcag

Basic information

species Vitis vinifera
transcript Vv08s0007g05210.t01
intron # 4
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|219555119|gb|FG984380.1|FG984380
EST:     TTTTGTTTTATACACAGAATTATAT                         TCATACTGTGTGGAATTTATTATTTTGGAGGGGGATAATCTGACCAGGCTA
genomic: TTTTGTTTTATACACAGAATTATATgtaagtgaag ... atgagtgcagTCATACTGTGTGGAATTTATTATTTTGGAGGGGGATAATCTGACCAGGCTA
EST: gi|219555444|gb|FG985057.1|FG985057
EST:     TTTTGTTTTATACACAGAATTATAT                         TCATACTGTGTGGAATTTATTATTTTGGAGGGGGATAATCTGACCAGGCTA
genomic: TTTTGTTTTATACACAGAATTATATgtaagtgaag ... atgagtgcagTCATACTGTGTGGAATTTATTATTTTGGAGGGGGATAATCTGACCAGGCTA