Skip to another splice site:
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 5'  3'   		2  
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 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GAAAAGATGACTCAAATCATGTTTGAGACTTTTAATGTGCCTGCCATGTATGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTGgttcgtattaaaatctttttggattggaattttcatttttcttttctgttgttagtgtagcctgagttctaacttgctcctttgactag

Basic information

species Vitis vinifera
transcript Vv04s0044g00580.t01
intron # 4
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: Vv04s0044g00580.t01 (Vitis vinifera), 5'ss of exon 4
lower sequence: LOC_Os11g06390.6 (Oryza sativa), 5'ss of exon 3
GAAAAGATGACTCAAATCATGTTTGAGACTTTTAATGTGCCTGCCATGTATGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTGgttcgtattaaaatctttttggattggaattttcatttttcttttctgttgttagtgtagcctgagttctaacttgctcctttgactag
|| |||||||| || ||||||||||||||||| |||||||| || |||||||| ||||| ||||| || || || || ||||||||||| ||||||||||||    | | |        ||| |  || |||| |    | ||  || || ||  || |   |   |  | |                 
GAGAAGATGACCCAGATCATGTTTGAGACTTTCAATGTGCCAGCTATGTATGTCGCCATCCAGGCCGTGCTCTCCCTGTATGCCAGTGGACGTACAACTGgtaataactca--ctcacatggttgagagttttaaaaaatattcact-ttattcatgaactgttgctcttgatgcag------------

upper sequence: Vv04s0044g00580.t01 (Vitis vinifera), 5'ss of exon 4
lower sequence: LOC_Os03g61970.1 (Oryza sativa), 5'ss of exon 3
GAAAAGATGACTCAAATCATGTTTGAGACTTTTAATGTGCCTGCCATGTATGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTGgttcgtattaaaat----ctttttggattggaatttt---cattttt-cttttctgttgttagtgtagcctgagttctaacttgctcctttgactag
|| || ||||| ||||||||||||||||| || ||||  || || |||||||| || ||||| ||||||||||| |||||||||||||| |||||||| ||   || |  |  |    || ||   | ||    |||   || ||     | |   ||| |  | |  ||  ||| |    | |||  |        
GAGAAAATGACCCAAATCATGTTTGAGACATTCAATGCACCAGCAATGTATGTGGCTATTCAAGCTGTTCTTTCACTATATGCCAGTGGTCGTACAACAGgcatgtgtccattttctactattcaaaatgagtctttgtacacttacatctcttcattggtgatatgaccccagtgcgttgtggcttgtgcag----

upper sequence: Vv04s0044g00580.t01 (Vitis vinifera), 5'ss of exon 4
lower sequence: LOC_Os05g01600.2 (Oryza sativa), 5'ss of exon 3
GAAAAGATGACTCAAATCATGTTTGAGACTTTTAATGTGCCTGCCATGTATGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTGgttcgtattaaaatctttttggattggaattttcat--------ttttcttttctgt-tgttagtgtagcctgagtt--ctaacttgctcctttgactag-
|| |||||||| || || |||||||||||||| ||||| ||||| ||||| || || || ||||| || ||||| || ||||||||||| ||||| ||||||  ||||  || || | |  |  |   | ||  ||        ||| ||    | |    | || |   |    |   ||  | | | | |||   ||  
GAGAAGATGACCCAGATTATGTTTGAGACTTTCAATGTCCCTGCAATGTACGTCGCTATCCAGGCCGTGCTTTCCCTCTATGCCAGTGGCCGTACTACTGgtatgtat-gaactcatctctgtcttttacttcaatgaggagggtttgctcaattatgcacttgtatgatccacctctgctgccatacacttttttttaat

upper sequence: Vv04s0044g00580.t01 (Vitis vinifera), 5'ss of exon 4
lower sequence: LOC_Os01g73310.1 (Oryza sativa), 5'ss of exon 3
GAAAAGATGACTCAAATCATGTTTGAGACTTTTAATGTGCCTGCCATGTATGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTGgttcgtattaaaatctttttggattggaattttcatttttcttttctgttgttagtgtagcctgagttcta-acttgctcctttgactag----------
|| || ||||| || || ||||||||||| || ||||| ||||||||||||||||| || || || || ||||| || ||||| ||||| || ||||| |||  ||  |    |  ||      |    ||   |||| |   |||| |||    | |||  | | ||  |     ||||   ||| ||           
GAGAAAATGACACAGATTATGTTTGAGACGTTCAATGTTCCTGCCATGTATGTTGCAATCCAAGCAGTGCTTTCACTCTATGCTAGTGGCCGAACAACAGgtatgtgatgttttacttaacttctttctttccaatttcttggttcttttgcatctatagattcatttagatgagagctcggatgattaagaactattct

upper sequence: Vv04s0044g00580.t01 (Vitis vinifera), 5'ss of exon 4
lower sequence: LOC_Os10g36650.1 (Oryza sativa), 5'ss of exon 3
GAAAAGATGACTCAAATCATGTTTGAGACTTTTAATGTGCCTGCCATGTATGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTGgttcgt------attaaaatctttttggattggaattttcatttttcttttctgttgttagtgtagcctgagttctaact---tgctcctttgactag--
|| |||||||| ||||| ||||||||||| || |  || || ||||||||||| || ||||| || || ||||| || ||||| ||||| ||||| ||||||  ||      |  | || | ||||   ||| || ||   |||| ||  ||||   |     |||     |  | |||    || |  |   |  |   
GAGAAGATGACACAAATTATGTTTGAGACATTCAGCGTTCCAGCCATGTATGTCGCTATTCAAGCCGTGCTTTCCCTCTATGCTAGTGGACGTACTACTGgtaagtgaacaaagaataagcattttcatttgtaaattctgttttgctactctggaatctcaatagagcaggaacaaaccgggtgatgttcaaatcaaat

upper sequence: Vv04s0044g00580.t01 (Vitis vinifera), 5'ss of exon 4
lower sequence: GRMZM2G126190_T02 (Zea mays), 5'ss of exon 3
GAAAAGATGACTCAAATCATGTTTGAGACTTTTAATGTGCCTGCCATGTATGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTGgttcgtattaaaatctttttggattggaattttcatttttcttttctgttgttagtgtagcctgagttctaacttgctcctttgactag
|| |||||||| ||||||||||||||||| || ||||| |||||||||||||| ||||| |||||||| ||||| || || |||||||||||||||||||||    |||    |     |||     || |||||||     || |     ||  |     || | || |   |||||  |    |   
GAGAAGATGACCCAAATCATGTTTGAGACCTTCAATGTTCCTGCCATGTATGTCGCCATCCAGGCTGTGCTTTCCCTGTACGCCAGTGGGCGTACAACTGgtaatgattct--ttaacatggtgaccaaatttcattaggacttcccaaattt--ttccatctcaattatggattgctgttccttcag-

upper sequence: Vv04s0044g00580.t01 (Vitis vinifera), 5'ss of exon 4
lower sequence: GRMZM2G006765_T02 (Zea mays), 5'ss of exon 3
GAAAAGATGACTCAAATCATGTTTGAGACTTTTAATGTGCCTGCCATGTATGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTGgttcgtattaaaatctttttggattggaattttcatttttcttttctgttgttagtgtagcctgagttctaacttgc--tcctttgactag
|| |||||||| |||||||||||||||||||| ||||| |||||||||||||| ||||| |||||||| ||||| || || |||||||| ||||||||||||    | |    |     |||     || |||||||     || |   | ||    |   || | || |   ||||  | | |     ||
GAGAAGATGACCCAAATCATGTTTGAGACTTTCAATGTTCCTGCCATGTATGTCGCCATCCAGGCTGTGCTTTCCCTGTACGCCAGTGGACGTACAACTGgtaatgactcg--ttcacatggcgaccaaatttcattaggacttacaaattttcccat---cttaattatgggttgctgttcatcattcag

upper sequence: Vv04s0044g00580.t01 (Vitis vinifera), 5'ss of exon 4
lower sequence: GRMZM2G067985_T03 (Zea mays), 5'ss of exon 2
GAAAAGATGACTCAAATCATGTTTGAGACTTTTAATGTGCCTGCCATGTATGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTGgttcgtattaaaa-tctttttggattggaatt--ttcatttttct--tttctgttgttagtgtagcctgagttctaacttgctcct-ttgactag-----
|| |||||||| ||||| |||||||||||||| ||||| ||||||||||||||||| || || || ||||| || || ||||| ||||||||||| ||||||  |   | |   |   |||   ||||  ||  |||| |||  |  ||   | |   |   |  | |   | | ||  ||||  | |  |||       
GAGAAGATGACCCAAATTATGTTTGAGACTTTCAATGTTCCTGCCATGTATGTTGCAATCCAAGCAGTTCTATCACTCTATGCTAGTGGGCGTACTACTGgtatgacctgatccttcctttactttggcgttgattcagtttcatagttctagctagcaacatctctttgatcccaatatgctgttgtcaactgtttatc

upper sequence: Vv04s0044g00580.t01 (Vitis vinifera), 5'ss of exon 4
lower sequence: GRMZM2G082484_T01 (Zea mays), 5'ss of exon 3
GAAAAGATGACTCAAATCATGTTTGAGACTTTTAATGTGCCTGCCATGTATGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTGgttcgtattaaaatctttttggattgga--attttcatttttcttttctgttgttagtgtagcctgagttctaacttgctcctttgactag----------
||||||||||| |||||||||||||| ||||| | ||| ||||| ||||||||||| ||||| ||||| ||||| || ||||| ||||| ||||| ||||||  ||  | ||||  |      ||     || | |||| || |||| || || |  || |  || | |      |       ||||| |           
GAAAAGATGACACAAATCATGTTTGAAACTTTCAGTGTTCCTGCTATGTATGTTGCTATTCAAGCTGTCCTTTCCCTTTATGCTAGTGGCCGTACCACTGgtaagtgatcaaataatcagcattttattcatgtacattctttttttttgctgctc-tggaatcttaatctagtataaactagttgaccaaaggtgaaata

upper sequence: Vv04s0044g00580.t01 (Vitis vinifera), 5'ss of exon 4
lower sequence: GRMZM2G030169_T02 (Zea mays), 5'ss of exon 3
GAAAAGATGACTCAAATCATGTTTGAGACTTTTAATGTGCCTGCCATGTATGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTGgttcgtattaaaatctttttggattggaattttcatttttcttttctgttgttagtgtagcctgagttctaacttgctcctttgactag--------------
||||||||||| |||||||||||||| || || | ||| ||||| ||||||||||| ||||| ||||| ||||| |||||||| ||||| ||||| ||||||  ||  | ||||  |  |   ||   ||||   |   |   |  ||||| |  || || |||   ||| | |    |    ||   |              
GAAAAGATGACACAAATCATGTTTGAAACCTTCAGTGTTCCTGCTATGTATGTTGCTATTCAAGCTGTGCTTTCCCTATATGCTAGTGGCCGTACCACTGgtaagtgatcaaataatcatcatttt--atttgtgtgcattcatcttgttgctc-tggagtctggaatcttaatcatccagcagaactgaattgaccaatggt

upper sequence: Vv04s0044g00580.t01 (Vitis vinifera), 5'ss of exon 4
lower sequence: GRMZM2G067985_T13 (Zea mays), 5'ss of exon 3
GAAAAGATGACTCAAATCATGTTTGAGACTTTTAATGTGCCTGCCATGTATGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTGgttcgtattaaaa-tctttttggattggaatt--ttcatttttct--tttctgttgttagtgtagcctgagttctaacttgctcct-ttgactag-----
|| |||||||| ||||| |||||||||||||| ||||| ||||||||||||||||| || || || || || || || ||||| ||||||||||| ||||||  |   | |   |   ||| | ||||  ||  |||| |||  |  ||   | |   |   |  | |   | | ||  ||||  | |  |||       
GAGAAGATGACCCAAATTATGTTTGAGACTTTCAATGTTCCTGCCATGTATGTTGCAATCCAAGCGGTGCTCTCACTCTATGCTAGTGGGCGTACTACTGgtatgacctgatccttcctttagtttggcgttgattcagtttcatagttctagctagcatcatctctttgatcccaatatgctgttgtcaactgtttatc

upper sequence: Vv04s0044g00580.t01 (Vitis vinifera), 5'ss of exon 4
lower sequence: GRMZM2G110378_T03 (Zea mays), 5'ss of exon 4
GAAAAGATGACTCAAATCATGTTTGAGACTTTTAATGTGCCTGCCATGTATGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTGgttcgtattaaaatctttttggattggaattttcatttttcttttctgttgttagtgtagcctgagttctaacttgctcctttgactag------------
|| |||||||| || || ||||| |||||||| ||||| ||||||||||| ||||| ||||| || || || || || ||||||||||| ||||| ||||||  | |      ||||  |  | |    | || |||     |||| ||| |  |   || |  |||  || ||   |  | | | ||             
GAGAAGATGACCCAGATTATGTTCGAGACTTTCAATGTTCCTGCCATGTACGTTGCAATTCAAGCAGTGCTGTCACTCTATGCCAGTGGACGTACTACTGgtatg-acctgcttcttcctttactttggtgttgattcagtatttcagttctctgaccagtcctagtaatatctctatggtctcaatatgctgttattaag

upper sequence: Vv04s0044g00580.t01 (Vitis vinifera), 5'ss of exon 4
lower sequence: GRMZM2G104017_T01 (Zea mays), 5'ss of exon 3
GAAAAGATGACTCAAATCATGTTTGAGACTTTTAATGTGCCTGCCATGTATGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTGgttcgtattaaaa--tctttttggattggaatt--ttcatttttct----tttctgttgttagtgtagcctgagttctaacttgctcctttgactag----
|| |||||||| || || ||||| |||||||| ||||| ||||||||||| ||||| ||||| || || || || || ||||| ||||| ||||| ||||||  |   |      || |||| | |  |  ||  | || ||||||     |     | || || |    |  | ||| |    | ||    | ||     
GAGAAGATGACCCAGATTATGTTCGAGACTTTCAATGTTCCTGCCATGTACGTTGCAATTCAAGCAGTCCTGTCACTCTATGCTAGTGGCCGTACTACTGgtatgacctgctccttccttttagttcagtgttgatccagttttctagtaatctctctctttgtttccattaggctcttatcaac-ccaccaagtatcttt

upper sequence: Vv04s0044g00580.t01 (Vitis vinifera), 5'ss of exon 4
lower sequence: GRMZM2G126010_T01 (Zea mays), 5'ss of exon 3
GAAAAGATGACTCAAATCATGTTTGAGACTTTTAATGTGCCTGCCATGTATGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTGgttcgtattaaaatctttttggattggaattttcatttttcttttct--gttgttagtgtagcctg-agttctaacttgctcctttgactag----------------
|| || ||||| || || |||||||| || ||  |    || || ||||||||||| || ||||||||||||||  | || || |||||||| |||||||||  | ||     ||   |  |||    ||  | || |    |       |  |   |  |  | | | | || ||  | ||  ||    |                 
GAGAAAATGACGCAGATTATGTTTGAAACCTTCGAATGCCCAGCAATGTATGTTGCTATCCAGGCTGTTCTTTCGTTGTACGCTAGTGGGCGAACAACTGgtaag-atggctgtcgcctcagatatatatagtgatatgcactacaaagatcatacatacatacggcaatcctgacacggtctctttgtcaaatatctctgtgtgcag

upper sequence: Vv04s0044g00580.t01 (Vitis vinifera), 5'ss of exon 4
lower sequence: GLYMA05G32220.1 (Glycine max), 5'ss of exon 2
GAAAAGATGACTCAAATCATGTTTGAGACTTTTAATGTGCCTGCCATGTATGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTGgttcgtattaaaatctttttggattggaattttcatttttcttttctgttgttagtgtagcctgagttctaacttgctcctttgactag
||||||||||| ||||||||||||||||| || |||||||||||||||||||| ||||| ||||||||||| ||  | ||||||||||| || |||||||||| ||||   |  |  | ||  |||     |||||| || | |  |    | | | |  ||     || |   | |   |   |  ||
GAAAAGATGACCCAAATCATGTTTGAGACCTTCAATGTGCCTGCCATGTATGTGGCCATCCAGGCTGTTCTCTCCTTGTATGCCAGTGGTCGCACAACTGgtttgtatatta--ccatctgtcttga----ttcattcttttataatcacatcattctttccctgaatcaa---ttcctttcaaaacag

upper sequence: Vv04s0044g00580.t01 (Vitis vinifera), 5'ss of exon 4
lower sequence: GLYMA08G15480.1 (Glycine max), 5'ss of exon 3
GAAAAGATGACTCAAATCATGTTTGAGACTTTTAATGTGCCTGCCATGTATGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTGgttcgtattaaaatctttttggattggaattttcatttttcttttctgttgttagtgtagcctgagttctaacttgctcctttgactag
||||||||||| ||||||||||||||||| || |||||||||||||||||||| ||||| ||||||||||| ||  | ||||| ||||| || |||||||||| ||||   |  |  | ||  |||     |||||| || | |  |    ||  | |  ||     || |   | |   ||  |  ||
GAAAAGATGACCCAAATCATGTTTGAGACCTTCAATGTGCCTGCCATGTATGTGGCCATCCAGGCTGTTCTCTCCTTGTATGCAAGTGGTCGCACAACTGgtttgtatatca--ccatctgtcttga----ttcattcttttataatcacattgttctttccctgaatcaa---ttccttttaaaacag

upper sequence: Vv04s0044g00580.t01 (Vitis vinifera), 5'ss of exon 4
lower sequence: GLYMA06G15520.2 (Glycine max), 5'ss of exon 3
GAAAAGATGACTCAAATCATGTTTGAGACTTTTAATGTGCCTGCCATGTATGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTGgttcgtattaaaatctttttggattggaattttcatttttcttttctgttgttagtgtagcctgagttctaacttgctcctttgactag
||||| ||||| ||||||||||||||||| || |||||||||||||||||||| ||||| |||||||| || || |||||||| ||||| || |||||||||| ||| | |  ||  | ||  ||      |||| |  | | |  |    ||  | || |||    || ||    ||  ||  |  ||
GAAAAAATGACCCAAATCATGTTTGAGACCTTCAATGTGCCTGCCATGTATGTGGCCATCCAGGCTGTCCTCTCCCTATATGCAAGTGGTCGCACAACTGgtttgtacttatttccatctgtcttaa----ttcactcctttgtcttcacattgttctatccttgaatcaaat---ctttttgaatcag

upper sequence: Vv04s0044g00580.t01 (Vitis vinifera), 5'ss of exon 4
lower sequence: GLYMA04G39380.2 (Glycine max), 5'ss of exon 3
GAAAAGATGACTCAAATCATGTTTGAGACTTTTAATGTGCCTGCCATGTATGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTGgttcgtattaaaatctttttggattggaattttcatttttcttttc-tgttgttagtgtagcctgagttctaacttgctcctttgactag
||||| ||||| ||||||||||||||||| || |||||||||||||||||||| ||||| || ||||| || || |||||||| ||||| || |||||||||| |||||   |||  | ||  ||  ||||   | |||| |  ||   |||||  |    ||||| |   |   | ||   |  |  ||
GAAAAAATGACCCAAATCATGTTTGAGACCTTCAATGTGCCTGCCATGTATGTGGCCATCCAAGCTGTCCTCTCCCTATATGCAAGTGGTCGCACAACTGgtttgtatttgtatccatctg--tttcaattcatagttttgtcatcacattgttctttc--cctgaatcaaa---tactttctgaaacag

upper sequence: Vv04s0044g00580.t01 (Vitis vinifera), 5'ss of exon 4
lower sequence: AT5G09810.1 (Arabidopsis thaliana), 5'ss of exon 3
GAAAAGATGACTCAAATCATGTTTGAGACTTTTAATGTGCCTGCCATGTATGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTGgttcgtattaaaatctttttggattggaattttcatttttcttttctgttgttagtgtagcctgagttctaacttgctcctttgactag
|| ||||||||||| |||||||||||||| || ||||| |||||||||||||||||||||||||| ||||||||||| ||||||||||| |||||||| |||| ||  | ||  || |    ||   | | |   || |  | |  | ||  | || |   || |         |  |  | | ||   
GAGAAGATGACTCAGATCATGTTTGAGACATTCAATGTCCCTGCCATGTATGTTGCCATTCAGGCCGTTCTTTCTCTCTATGCCAGTGGTCGTACAACCGgttagttcttaa--ctctaaacatccaagtctgagttatattatcttcttacttgtatttacttaaagtcgttctctttttgtaacag-

upper sequence: Vv04s0044g00580.t01 (Vitis vinifera), 5'ss of exon 4
lower sequence: AT1G49240.1 (Arabidopsis thaliana), 5'ss of exon 3
GAAAAGATGACTCAAATCATGTTTGAGACTTTTAATGTGCCTGCCATGTATGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTGgttcgt--attaa-aatctttttggattgga---attttcatttttcttttctgttgttagtgtagcctgagttctaacttgctc-ctttgactag
|| ||||||||||| |||||||||||||| ||||||   || || ||||||||||||||||| |||||||| || || || |||||||| |||||||| |||| ||  ||||  ||| |      | || |   | |||  ||||   ||| |  || |  |||    |   |   |      |   |||   |||
GAGAAGATGACTCAGATCATGTTTGAGACCTTTAATTCTCCAGCTATGTATGTTGCCATTCAAGCTGTTCTATCACTTTACGCCAGTGGTCGTACAACCGgttagttcattattaatgtcgagaaaatgaacaaagttttgttttctgtttttaatgattatgtcatattgatcacagtgaaatgattttctttag

upper sequence: Vv04s0044g00580.t01 (Vitis vinifera), 5'ss of exon 4
lower sequence: AT3G18780.1 (Arabidopsis thaliana), 5'ss of exon 2
GAAAAGATGACTCAAATCATGTTTGAGACTTTTAATGTGCCTGCCATGTATGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTGgttcgtattaaaatctttttggattggaattttcatttttcttttctgttgttagtgtagcctgagttctaact-tgctcctttgactag
|| |||||||||||||||||||||||||| |||||    || || |||||||| ||||| || |||||||| ||  | || |||||||| |||||||| |||| |||       | |||| |  |     |||  ||| |  |   || |  |  | |   ||||| ||| | | |  ||| ||||  ||
GAGAAGATGACTCAAATCATGTTTGAGACCTTTAACTCTCCCGCTATGTATGTCGCCATCCAAGCTGTTCTCTCCTTGTACGCCAGTGGTCGTACAACCGgttagta-------cattttaggct-----ttttgtttatactcattgatcattatttgaactgagctctgattatcttccattgaacag

upper sequence: Vv04s0044g00580.t01 (Vitis vinifera), 5'ss of exon 4
lower sequence: PP1S337_21V6.2 (Physcomitrella patens), 5'ss of exon 4
GAAAAGATGACTCAAATCATGTTTGAGACTTTTAATGTGCCTGCCATGTATGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTGgttcgt-attaaaatctttttggattggaattttcatttttctt--ttctgttgttagtgtagcctgagttctaacttgctcctttgactag-----------------------------------------------------------------
|| |||||||| || |||||||| ||||| || || ||||| || ||||| || ||||||||||| || || || |||||||||||||| || || || |||  || ||   |       ||   || |     ||| |   ||  ||  |    | ||| ||          |  | |    ||||||  |                                                                 
GAGAAGATGACGCAGATCATGTTCGAGACGTTCAACGTGCCGGCGATGTACGTGGCCATTCAGGCAGTGCTGTCACTATATGCCAGTGGACGAACGACCGgtgagtgatgggagaaggggtgaggtgaatgcagcatgtgcgttggttgcgaaagtggtggaggtgtgtggagaggtggggtgtttgacatgggaaggtttgtgggtcggggtaagaaactgagagcagttgtggtgatgaatgcaatgcaatgcag

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|161715437|gb|FC069037.1|FC069037
EST:     TGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTG                         GTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAA
genomic: TGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTGgttcgtatta ... ctttgactagGTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAA
EST: gi|294966458|gb|GW839565.1|GW839565
EST:     TGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTG                         GTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
genomic: TGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTGgttcgtatta ... ctttgactagGTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
EST: gi|349813371|gb|FQ413629.1|FQ413629
EST:     CAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTG                         GTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
genomic: CAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTGgttcgtatta ... ctttgactagGTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
EST: gi|351016117|gb|FQ432072.1|FQ432072
EST:     TGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGTCGTACAACTG                         GTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
genomic: TGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTGgttcgtatta ... ctttgactagGTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
EST: gi|110703663|gb|EE080716.1|EE080716
EST:     TGTTGCCATTCAAGCTGTTCTTTCTCTATATGCCAGTGGTCGTACAACTG                         GTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
genomic: TGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTGgttcgtatta ... ctttgactagGTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
EST: gi|71863034|gb|DT012089.1|DT012089
EST:     TGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGTCGTACAACTG                         GTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
genomic: TGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTGgttcgtatta ... ctttgactagGTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
EST: gi|351038364|gb|FQ461056.1|FQ461056
EST:     CAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTG                         GTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
genomic: CAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTGgttcgtatta ... ctttgactagGTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
EST: gi|161709747|gb|FC058048.1|FC058048
EST:     TGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTG                         GTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
genomic: TGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTGgttcgtatta ... ctttgactagGTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
EST: gi|161715877|gb|FC067456.1|FC067456
EST:     TGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTG                         GTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCCATTTATG
genomic: TGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTGgttcgtatta ... ctttgactagGTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
EST: gi|30297466|gb|CB974260.1|CB974260
EST:     TGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGTCGTACAACTG                         GTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
genomic: TGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTGgttcgtatta ... ctttgactagGTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
EST: gi|351029124|gb|FQ435324.1|FQ435324
EST:     TGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTG                         GTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
genomic: TGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTGgttcgtatta ... ctttgactagGTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
EST: gi|351038133|gb|FQ465250.1|FQ465250
EST:     CAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTG                         GTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
genomic: CAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTGgttcgtatta ... ctttgactagGTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
EST: gi|349821950|gb|FQ408279.1|FQ408279
EST:     CAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTG                         GTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
genomic: CAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTGgttcgtatta ... ctttgactagGTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
EST: gi|351046731|gb|FQ453347.1|FQ453347
EST:     CAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTG                         GTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
genomic: CAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTGgttcgtatta ... ctttgactagGTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
EST: gi|351027402|gb|FQ444651.1|FQ444651
EST:     TGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGTCGTACAACTG                         GTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
genomic: TGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTGgttcgtatta ... ctttgactagGTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
EST: gi|27583674|gb|CB006369.1|CB006369
EST:     ATTCAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTG                         GTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
genomic: ATTCAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTGgttcgtatta ... ctttgactagGTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
EST: gi|352790176|gb|FQ481375.1|FQ481375
EST:     CAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTG                         GTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
genomic: CAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTGgttcgtatta ... ctttgactagGTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
EST: gi|161718707|gb|FC066630.1|FC066630
EST:     TGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTG                         GTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
genomic: TGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTGgttcgtatta ... ctttgactagGTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
EST: gi|110697017|gb|EE073639.1|EE073639
EST:     TGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTG                         GTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
genomic: TGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTGgttcgtatta ... ctttgactagGTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
EST: gi|30304868|gb|CB981662.1|CB981662
EST:     TGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGTCGTACAACTG                         GTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
genomic: TGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTGgttcgtatta ... ctttgactagGTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
EST: gi|351033564|gb|FQ447723.1|FQ447723
EST:     TGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGTCGTACAACTG                         GTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
genomic: TGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTGgttcgtatta ... ctttgactagGTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
EST: gi|110732373|gb|EE107605.1|EE107605
EST:     TGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGTCGTACAACTG                         GTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
genomic: TGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTGgttcgtatta ... ctttgactagGTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
EST: gi|349829771|gb|FQ421289.1|FQ421289
EST:     CAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTG                         GTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
genomic: CAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTGgttcgtatta ... ctttgactagGTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
EST: gi|161720901|gb|FC070998.1|FC070998
EST:     TGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGTCGTACAACTG                         GTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
genomic: TGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTGgttcgtatta ... ctttgactagGTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
EST: gi|161718238|gb|FC066957.1|FC066957
EST:     TGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTG                         GTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
genomic: TGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTGgttcgtatta ... ctttgactagGTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
EST: gi|161716881|gb|FC064972.1|FC064972
EST:     TGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTG                         GTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
genomic: TGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTGgttcgtatta ... ctttgactagGTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
EST: gi|351014693|gb|FQ437893.1|FQ437893
EST:     TGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGTCGTACAATTG                         GTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
genomic: TGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTGgttcgtatta ... ctttgactagGTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
EST: gi|32265252|gb|CD716841.1|CD716841
EST:     TGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTG                         GTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
genomic: TGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTGgttcgtatta ... ctttgactagGTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
EST: gi|110721058|gb|EE097624.1|EE097624
EST:     TGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTG                         GTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
genomic: TGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTGgttcgtatta ... ctttgactagGTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
EST: gi|349829797|gb|FQ422110.1|FQ422110
EST:     TGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGTCGTACAACTG                         GTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
genomic: TGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTGgttcgtatta ... ctttgactagGTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
EST: gi|110724889|gb|EE101112.1|EE101112
EST:     TGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGTCGTACAACTG                         GTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
genomic: TGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTGgttcgtatta ... ctttgactagGTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
EST: gi|351046785|gb|FQ454395.1|FQ454395
EST:     CAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTG                         GTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
genomic: CAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTGgttcgtatta ... ctttgactagGTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
EST: gi|161713351|gb|FC063362.1|FC063362
EST:     TGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGTCGTACAACTG                         GTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
genomic: TGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTGgttcgtatta ... ctttgactagGTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
EST: gi|110687074|gb|EE064164.1|EE064164
EST:     TGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTG                         GTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
genomic: TGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTGgttcgtatta ... ctttgactagGTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
EST: gi|349826595|gb|FQ418686.1|FQ418686
EST:     TGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTG                         GTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
genomic: TGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTGgttcgtatta ... ctttgactagGTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
EST: gi|161714150|gb|FC064415.1|FC064415
EST:     TGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTG                         GTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
genomic: TGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTGgttcgtatta ... ctttgactagGTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
EST: gi|349820002|gb|FQ404724.1|FQ404724
EST:     CAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTG                         GTATTGTGCTGGATTCTGGTGATGGTGTGAGCCACACTGTGCCAATTTATG
genomic: CAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTGgttcgtatta ... ctttgactagGTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
EST: gi|352789899|gb|FQ478714.1|FQ478714
EST:     CAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTG                         GTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
genomic: CAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTGgttcgtatta ... ctttgactagGTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
EST: gi|349819210|gb|FQ412104.1|FQ412104
EST:     CAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTG                         GTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
genomic: CAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTGgttcgtatta ... ctttgactagGTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
EST: gi|349810090|gb|FQ401536.1|FQ401536
EST:     GGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTG                         GTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
genomic: GGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTGgttcgtatta ... ctttgactagGTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
EST: gi|349823118|gb|FQ400097.1|FQ400097
EST:     CAGGCTGTTCTTTCTCTATCCGTCAGTGGGCGTACAACTG                         GTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
genomic: CAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTGgttcgtatta ... ctttgactagGTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
EST: gi|37184211|gb|CF603565.1|CF603565
EST:     TGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTG                         GTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
genomic: TGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTGgttcgtatta ... ctttgactagGTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
EST: gi|110689827|gb|EE066394.1|EE066394
EST:     TGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTG                         GTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
genomic: TGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTGgttcgtatta ... ctttgactagGTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
EST: gi|110720140|gb|EE095802.1|EE095802
EST:     TGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGTCGTACAACTG                         GTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
genomic: TGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTGgttcgtatta ... ctttgactagGTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
EST: gi|161716586|gb|FC067172.1|FC067172
EST:     TGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGTCGTACAACTG                         GTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
genomic: TGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTGgttcgtatta ... ctttgactagGTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
EST: gi|110701110|gb|EE078355.1|EE078355
EST:     CTTTCTCTATATGCCAGTGGGCGTACAACTG                         GTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
genomic: CTTTCTCTATATGCCAGTGGGCGTACAACTGgttcgtatta ... ctttgactagGTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
EST: gi|30323594|gb|CD006856.1|CD006856
EST:     TGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTG                         GTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
genomic: TGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTGgttcgtatta ... ctttgactagGTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
EST: gi|110721193|gb|EE097911.1|EE097911
EST:     TGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTG                         GTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGNGCCAATTTATG
genomic: TGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTGgttcgtatta ... ctttgactagGTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
EST: gi|110709158|gb|EE084373.1|EE084373
EST:     TGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTG                         GTATTGTGCTGGATTCTGGTGATGGTGTGAATCACACTGTGCCAATTTATG
genomic: TGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTGgttcgtatta ... ctttgactagGTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
EST: gi|27578609|gb|CB001304.1|CB001304
EST:     TGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTG                         GTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCNCA-TTTAT
genomic: TGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTGgttcgtatta ... ctttgactagGTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGC-CAATTTAT
EST: gi|161718593|gb|FC067914.1|FC067914
EST:     TGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGTCGTACAACTG                         GTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
genomic: TGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTGgttcgtatta ... ctttgactagGTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
EST: gi|352798915|gb|FQ480764.1|FQ480764
EST:     CAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTG                         GTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
genomic: CAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTGgttcgtatta ... ctttgactagGTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
EST: gi|349810430|gb|FQ401876.1|FQ401876
EST:     CAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTG                         GTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
genomic: CAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTGgttcgtatta ... ctttgactagGTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
EST: gi|110382963|gb|EC947296.1|EC947296
EST:     TGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGTCGTACAACTG                         GTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
genomic: TGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTGgttcgtatta ... ctttgactagGTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
EST: gi|349811189|gb|FQ406177.1|FQ406177
EST:     CAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTG                         GTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
genomic: CAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTGgttcgtatta ... ctttgactagGTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
EST: gi|110698021|gb|EE075559.1|EE075559
EST:     TGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTG                         GTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
genomic: TGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTGgttcgtatta ... ctttgactagGTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
EST: gi|110695915|gb|EE074476.1|EE074476
EST:     TGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTG                         GTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
genomic: TGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTGgttcgtatta ... ctttgactagGTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
EST: gi|349826811|gb|FQ418902.1|FQ418902
EST:     CAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTG                         GTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
genomic: CAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTGgttcgtatta ... ctttgactagGTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
EST: gi|110708736|gb|EE086617.1|EE086617
EST:     TGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTG                         GTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
genomic: TGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTGgttcgtatta ... ctttgactagGTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
EST: gi|349817344|gb|FQ405348.1|FQ405348
EST:     CAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTG                         GTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
genomic: CAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTGgttcgtatta ... ctttgactagGTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
EST: gi|110700776|gb|EE077727.1|EE077727
EST:     TGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGTCGTACAACTG                         GTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
genomic: TGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTGgttcgtatta ... ctttgactagGTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
EST: gi|33407760|gb|CF213387.1|CF213387
EST:     TGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGTCGTACAACTG                         GTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
genomic: TGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTGgttcgtatta ... ctttgactagGTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
EST: gi|37186701|gb|CF606054.1|CF606054
EST:     TGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTG                         GTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
genomic: TGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTGgttcgtatta ... ctttgactagGTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
EST: gi|27579389|gb|CB002084.1|CB002084
EST:     TGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTG                         GTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
genomic: TGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTGgttcgtatta ... ctttgactagGTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
EST: gi|351047041|gb|FQ454651.1|FQ454651
EST:     CAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTG                         GTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACATTGTGCCAATTTATG
genomic: CAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTGgttcgtatta ... ctttgactagGTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
EST: gi|352790086|gb|FQ479696.1|FQ479696
EST:     CAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTG                         GTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
genomic: CAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTGgttcgtatta ... ctttgactagGTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
EST: gi|349811698|gb|FQ409695.1|FQ409695
EST:     CAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTG                         GTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
genomic: CAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTGgttcgtatta ... ctttgactagGTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
EST: gi|349817723|gb|FQ407712.1|FQ407712
EST:     CAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTG                         GTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
genomic: CAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTGgttcgtatta ... ctttgactagGTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
EST: gi|349807774|gb|FQ402165.1|FQ402165
EST:     CAGGCTGTCCTTTCTCTATATGCCAGTGGGCGTACAACTG                         GTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
genomic: CAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTGgttcgtatta ... ctttgactagGTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
EST: gi|351026725|gb|FQ436378.1|FQ436378
EST:     TGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTG                         GTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
genomic: TGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTGgttcgtatta ... ctttgactagGTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
EST: gi|349830952|gb|FQ418236.1|FQ418236
EST:     CAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTG                         GTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
genomic: CAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTGgttcgtatta ... ctttgactagGTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
EST: gi|110698207|gb|EE075493.1|EE075493
EST:     TGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTG                         GTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
genomic: TGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTGgttcgtatta ... ctttgactagGTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
EST: gi|161718489|gb|FC067310.1|FC067310
EST:     TGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTG                         GTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
genomic: TGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTGgttcgtatta ... ctttgactagGTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
EST: gi|161719886|gb|FC069015.1|FC069015
EST:     TGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTG                         GTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
genomic: TGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTGgttcgtatta ... ctttgactagGTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
EST: gi|161712262|gb|FC061885.1|FC061885
EST:     TGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTG                         GTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
genomic: TGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTGgttcgtatta ... ctttgactagGTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
EST: gi|351014010|gb|FQ434162.1|FQ434162
EST:     TGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGTCGTACAACTG                         GTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
genomic: TGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTGgttcgtatta ... ctttgactagGTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
EST: gi|110722642|gb|EE099048.1|EE099048
EST:     TGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGTCGTACAACTG                         GTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
genomic: TGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTGgttcgtatta ... ctttgactagGTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
EST: gi|351028044|gb|FQ425945.1|FQ425945
EST:     TGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTG                         GTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
genomic: TGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTGgttcgtatta ... ctttgactagGTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
EST: gi|352790191|gb|FQ481390.1|FQ481390
EST:     CAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTG                         GTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
genomic: CAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTGgttcgtatta ... ctttgactagGTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
EST: gi|161720100|gb|FC065464.1|FC065464
EST:     TGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGTCGTACAACTG                         GTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
genomic: TGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTGgttcgtatta ... ctttgactagGTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
EST: gi|87584204|gb|DY473449.1|DY473449
EST:     TGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTG                         GTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
genomic: TGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTGgttcgtatta ... ctttgactagGTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
EST: gi|352794097|gb|FQ479339.1|FQ479339
EST:     CAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTG                         GTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACATTGTGCCAATTTATG
genomic: CAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTGgttcgtatta ... ctttgactagGTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
EST: gi|349820959|gb|FQ408667.1|FQ408667
EST:     CAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTA                         GTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
genomic: CAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTGgttcgtatta ... ctttgactagGTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
EST: gi|351041983|gb|FQ456193.1|FQ456193
EST:     CAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTG                         GTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
genomic: CAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTGgttcgtatta ... ctttgactagGTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
EST: gi|34550536|gb|CF518754.1|CF518754
EST:     TGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTG                         GTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
genomic: TGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTGgttcgtatta ... ctttgactagGTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
EST: gi|110700088|gb|EE077724.1|EE077724
EST:     TGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTG                         GTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
genomic: TGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTGgttcgtatta ... ctttgactagGTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
EST: gi|110690418|gb|EE067510.1|EE067510
EST:     TGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTG                         GTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
genomic: TGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTGgttcgtatta ... ctttgactagGTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
EST: gi|110393093|gb|EC958006.1|EC958006
EST:     TGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGTCGTACAACTG                         GTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
genomic: TGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTGgttcgtatta ... ctttgactagGTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
EST: gi|161715776|gb|FC066180.1|FC066180
EST:     TGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTG                         GTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
genomic: TGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTGgttcgtatta ... ctttgactagGTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
EST: gi|161717624|gb|FC066903.1|FC066903
EST:     TGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTG                         GTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
genomic: TGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTGgttcgtatta ... ctttgactagGTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
EST: gi|351034437|gb|FQ463250.1|FQ463250
EST:     CAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTG                         GTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
genomic: CAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTGgttcgtatta ... ctttgactagGTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
EST: gi|34545587|gb|CF513819.1|CF513819
EST:     TGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGTCGTACAACTG                         GTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
genomic: TGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTGgttcgtatta ... ctttgactagGTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
EST: gi|30326025|gb|CD009287.1|CD009287
EST:     TGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTG                         GTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
genomic: TGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTGgttcgtatta ... ctttgactagGTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
EST: gi|351057486|gb|FQ440080.1|FQ440080
EST:     CAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTG                         GTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
genomic: CAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTGgttcgtatta ... ctttgactagGTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
EST: gi|37186726|gb|CF606079.1|CF606079
EST:     TGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTG                         GTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
genomic: TGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTGgttcgtatta ... ctttgactagGTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
EST: gi|351023356|gb|FQ432739.1|FQ432739
EST:     CAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTG                         GTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
genomic: CAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTGgttcgtatta ... ctttgactagGTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
EST: gi|161716009|gb|FC067149.1|FC067149
EST:     TGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTG                         GTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
genomic: TGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTGgttcgtatta ... ctttgactagGTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
EST: gi|32269188|gb|CD718347.1|CD718347
EST:     TGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTG                         GTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
genomic: TGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTGgttcgtatta ... ctttgactagGTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
EST: gi|110711315|gb|EE087670.1|EE087670
EST:     TGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGTCGTACAACTG                         GTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
genomic: TGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTGgttcgtatta ... ctttgactagGTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
EST: gi|71860447|gb|DT009502.1|DT009502
EST:     TGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGTCGTACAACTG                         GTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
genomic: TGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTGgttcgtatta ... ctttgactagGTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
EST: gi|30324190|gb|CD007452.1|CD007452
EST:     TGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTG                         GTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
genomic: TGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTGgttcgtatta ... ctttgactagGTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
EST: gi|110701484|gb|EE079104.1|EE079104
EST:     TGTTGCCATTCAAGCTGTTCTTTCTCTATATGCCAGTGGTCGTACAACTG                         GTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
genomic: TGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTGgttcgtatta ... ctttgactagGTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
EST: gi|110699170|gb|EE075932.1|EE075932
EST:     TGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTG                         GTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
genomic: TGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTGgttcgtatta ... ctttgactagGTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
EST: gi|110703875|gb|EE081193.1|EE081193
EST:     TGTTGCCATTCAAGCTGTTCTTTCTCTATATGCCAGTGGTCGTACAACTG                         GTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
genomic: TGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTGgttcgtatta ... ctttgactagGTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
EST: gi|351024912|gb|FQ433329.1|FQ433329
EST:     TGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGTCGTACAACTG                         GTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
genomic: TGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTGgttcgtatta ... ctttgactagGTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
EST: gi|110698024|gb|EE075562.1|EE075562
EST:     TGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGTCGTACAACTG                         GTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
genomic: TGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTGgttcgtatta ... ctttgactagGTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
EST: gi|161720220|gb|FC070872.1|FC070872
EST:     TGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGTCGTACAACTG                         GTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
genomic: TGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTGgttcgtatta ... ctttgactagGTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
EST: gi|351028190|gb|FQ426091.1|FQ426091
EST:     TGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGTCGTACAACCG                         GTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
genomic: TGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTGgttcgtatta ... ctttgactagGTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
EST: gi|110711556|gb|EE088173.1|EE088173
EST:     TGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTG                         GTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
genomic: TGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTGgttcgtatta ... ctttgactagGTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
EST: gi|161715182|gb|FC065792.1|FC065792
EST:     TGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTG                         GTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
genomic: TGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTGgttcgtatta ... ctttgactagGTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
EST: gi|349811093|gb|FQ406081.1|FQ406081
EST:     CAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTG                         GTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
genomic: CAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTGgttcgtatta ... ctttgactagGTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
EST: gi|110711057|gb|EE087182.1|EE087182
EST:     TGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTG                         GTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
genomic: TGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTGgttcgtatta ... ctttgactagGTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
EST: gi|351025029|gb|FQ433446.1|FQ433446
EST:     TGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGTCGTACAACTG                         GTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
genomic: TGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTGgttcgtatta ... ctttgactagGTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
EST: gi|110699598|gb|EE076737.1|EE076737
EST:     TGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGTCGTACAACTG                         GTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
genomic: TGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTGgttcgtatta ... ctttgactagGTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
EST: gi|352795643|gb|FQ480231.1|FQ480231
EST:     CAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTG                         GTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
genomic: CAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTGgttcgtatta ... ctttgactagGTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
EST: gi|161714410|gb|FC064421.1|FC064421
EST:     TGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGTCGTACAACTG                         GTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
genomic: TGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTGgttcgtatta ... ctttgactagGTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
EST: gi|110726837|gb|EE102970.1|EE102970
EST:     TGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTG                         GTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
genomic: TGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTGgttcgtatta ... ctttgactagGTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
EST: gi|110687924|gb|EE065892.1|EE065892
EST:     TGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTG                         GTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG
genomic: TGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTGgttcgtatta ... ctttgactagGTATTGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTGCCAATTTATG

Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
GAAAAGATGACTCAAATCATGTTTGAGACTTTTAATGTGCCTGCCATGTATGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTGgttcgtattaaaatctttttggattggaattttcatttttcttttctgttgttagtgtagcctgagttctaacttgctcctttgactag

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  GCTGTT