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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TTTACCTTGACCAGGTAAAGAATTCATTAACAGATCGGATTGAGATATCTGCTCAGAACTCTTGGGTTGGGAAAGGTGGTGCTTTCACAGGAGAAATCAGgttagtttgctccttcttgttaattaccaaaaaagaacaaagttgtttcacagttttctaatacttaaaagaatttagcttttccttttttcttgtgcta...

Basic information

species Vitis vinifera
transcript Vv03s0038g01780.t01
intron # 4
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: Vv03s0038g01780.t01 (Vitis vinifera), 5'ss of exon 4
lower sequence: GLYMA03G34300.1 (Glycine max), 5'ss of exon 4
TTTACCTTGACCAGGTAAAGAATTCATTAACAGATCGGATTGAGATATCTGCTCAGAACTCTTGGGTTGGGAAAGGTGGTGCTTTCACAGGAGAAATCAGgttagtttgctccttcttgttaattaccaaaaaagaacaaagttgtttcacagttttctaatactt----aaaagaatt-tagct--tttccttttttcttgtgcta
| ||| | || || || || || ||| | || || |||||||| |||||||| ||||| ||||||||||| |||||||||||||| || |||||||||||||||| ||| ||     ||||||||   | | | |       || |||      ||| ||||  ||    ||  | ||  || |   |  | |  ||| || ||   
TCTACATCGATCAAGTGAAAAACTCACTCACTGAGCGGATTGAAATATCTGCCCAGAATTCTTGGGTTGGAAAAGGTGGTGCTTTTACTGGAGAAATCAGgttagcttgttcaag--tgttaattg--atacatgtttctttttattttttgaatttataatgtttggtcaattggatgataacagataccgtccttttttatg---

upper sequence: Vv03s0038g01780.t01 (Vitis vinifera), 5'ss of exon 4
lower sequence: GLYMA19G36990.2 (Glycine max), 5'ss of exon 4
TTTACCTTGACCAGGTAAAGAATTCATTAACAGATCGGATTGAGATATCTGCTCAGAACTCTTGGGTTGGGAAAGGTGGTGCTTTCACAGGAGAAATCAGgttagtttgctccttcttgttaattaccaaaaaagaacaaagttgtttcacagttttctaatacttaaaagaatttagct--tttccttttttcttgtgcta--
| ||| |||| || || || || ||| | || ||  ||||||| |||||||| ||||| |||||||| || ||||||||||||||||| |||||||||||||||| |  | | ||| | | || |   ||    || | ||| | | ||    | || | ||  || | ||  ||| |||  ||      ||     | |    
TGTACATTGATCAAGTGAAAAACTCACTCACTGAGAGGATTGAAATATCTGCCCAGAATTCTTGGGTGGGAAAAGGTGGTGCTTTCACGGGAGAAATCAGgttagctcacactttcctttcaagtgttaatt--gatctaaggtttctctttatattttgat--tttatagtgtttggctagttggacgattgtagataccttc

upper sequence: Vv03s0038g01780.t01 (Vitis vinifera), 5'ss of exon 4
lower sequence: GLYMA13G20930.1 (Glycine max), 5'ss of exon 4
TTTACCTTGACCAGGTAAAGAATTCATTAACAGATCGGATTGAGATATCTGCTCAGAACTCTTGGGTTGGGAAAGGTGGTGCTTTCACAGGAGAAATCAGgttagtttgctccttcttgttaattaccaaaaaagaacaaagttgtttcacagttttctaatacttaaaagaatttagcttttccttttttcttgtgcta-----
| ||| | || ||||| || || ||| | |||||| ||||||| || ||||| ||||| |||||||| || |||||||| |||||||| |||||||||||||||| ||||   ||| |||||| |  || |    ||     ||| | |   || ||||  |   |  |   |    | | | ||  ||   | ||| |      
TGTACATCGATCAGGTGAAAAACTCAATTACAGATAGGATTGAAATTTCTGCCCAGAATTCTTGGGTGGGAAAAGGTGGGGCTTTCACGGGAGAAATCAGgttagcttgcctattcctgttaagtttcacatgttaa-----ttgatcctgggtcttctgttttctttatagagaatgttatgccagttggatggtgatgacaga

upper sequence: Vv03s0038g01780.t01 (Vitis vinifera), 5'ss of exon 4
lower sequence: GLYMA10G06740.1 (Glycine max), 5'ss of exon 4
TTTACCTTGACCAGGTAAAGAATTCATTAACAGATCGGATTGAGATATCTGCTCAGAACTCTTGGGTTGGGAAAGGTGGTGCTTTCACAGGAGAAATCAGgttagtttgctccttcttgttaattaccaaaa--aagaacaaagttgtttcacagttttctaatacttaaaagaatttagcttttccttttttcttgtgcta
| ||| | || ||||| || || ||| | |||||| ||||||| || ||||| ||||| |||||||| || |||||||| |||||||| |||||||||||||||| ||||   ||| |||||| |  || ||   | |    | | | | |   |  ||||  |   |  | | |    | |   | | ||   | |||   
TGTACATCGATCAGGTGAAAAACTCAATTACAGATAGGATTGAAATTTCTGCCCAGAATTCTTGGGTGGGAAAAGGTGGGGCTTTCACGGGAGAAATCAGgttagcttgccttttcctgttaagtttcacaattcacatgtcaatcgatcctgggacttctgttttctttatggagaatgttaggcttgttggttggtga--

upper sequence: Vv03s0038g01780.t01 (Vitis vinifera), 5'ss of exon 4
lower sequence: AT2G21170.2 (Arabidopsis thaliana), 5'ss of exon 3
TTTACCTTGACCAGGTAAAGAATTCATTAACAGATCGGATTGAGATATCTGCTCAGAACTCTTGGGTTGGGAAAGGTGGTGCTTTCACAGGAGAAATCAGgtta-gtttgctccttcttgttaattaccaaaaaagaacaaagttgtttcacagtttt---ctaatacttaaaagaatt-tagcttttccttttttcttgtgcta-------------------------------------------------------
| ||| | |||||||| ||    || || ||||| || ||||| ||||| | ||||||||||||||||||||||||||| || ||||| || |||||||||||| |  | ||| || |   | || || | |         | ||| || | | ||||   | || |  | | ||  ||  | ||  ||| |  || |     |                                                        
TCTACATCGACCAGGTCAAATCCTCGTTGACAGACCGTATTGACATATCAGGTCAGAACTCTTGGGTTGGGAAAGGTGGAGCCTTCACTGGTGAAATCAGgttacgacttctctttttcacttat-actatatctctttttatttgattgaaattttttgacgaaaatattagagcgttgcaactaatccctccttatgactttccggtgtaatatatgaaccttgtctgaatttcaaagttgcccgttttaccatacag

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|110730538|gb|EE107734.1|EE107734
EST:     GCTCAAAACTCTTGGGTTGGGAAAGGTGGTGCTTTCACAGGAGAAATCAG                         TGTGGAACAATTGAAAGATATTGGCTGCAACTGGGTTATCCTTGGGCACTC
genomic: GCTCAGAACTCTTGGGTTGGGAAAGGTGGTGCTTTCACAGGAGAAATCAGgttagtttgc ... cctgatgtagTGTGGAACAATTGAAAGATATTGGCTGCAACTGGGTTATCCTTGGGCACTC
EST: gi|34545318|gb|CF513550.1|CF513550
EST:     GCTCAGAACTCTTGGGTTGGGAAAGGTGGTGCTTTCACAGGAGAAATCAG                         TGTGGAACAATTGAAAGATATTGGCTGCAACTGGGTTATCCTTGGGCACTC
genomic: GCTCAGAACTCTTGGGTTGGGAAAGGTGGTGCTTTCACAGGAGAAATCAGgttagtttgc ... cctgatgtagTGTGGAACAATTGAAAGATATTGGCTGCAACTGGGTTATCCTTGGGCACTC
EST: gi|110713056|gb|EE088645.1|EE088645
EST:     GCTCAGAACTCTTGGGTTGGGAAAGGTGGTGCTTTCACAGGAGAAATCAG                         TGTGGAACAATTGAAAGATATTGGCTGCAACTGGGTTATCCTTGGGCACTC
genomic: GCTCAGAACTCTTGGGTTGGGAAAGGTGGTGCTTTCACAGGAGAAATCAGgttagtttgc ... cctgatgtagTGTGGAACAATTGAAAGATATTGGCTGCAACTGGGTTATCCTTGGGCACTC
EST: gi|110692798|gb|EE068468.1|EE068468
EST:     GCTCAGAACTCTTGGGTTGGGAAAGGTGGTGCTTTCACAGGAGAAATCAG                         TGTGGAACAATTGAAAGATATTGGCTGCAACTGGGTTATCCTTGGGCACTC
genomic: GCTCAGAACTCTTGGGTTGGGAAAGGTGGTGCTTTCACAGGAGAAATCAGgttagtttgc ... cctgatgtagTGTGGAACAATTGAAAGATATTGGCTGCAACTGGGTTATCCTTGGGCACTC
EST: gi|27580841|gb|CB003536.1|CB003536
EST:     GCTCAGAACTCTTGGGTTGGGAAAGGTGGTGCTTTCACAGGAGAAATCAG                         TGTGGAACAATTGAAAGATATTGGCTGCAACTGGGTTATCCTTGGGCACTC
genomic: GCTCAGAACTCTTGGGTTGGGAAAGGTGGTGCTTTCACAGGAGAAATCAGgttagtttgc ... cctgatgtagTGTGGAACAATTGAAAGATATTGGCTGCAACTGGGTTATCCTTGGGCACTC
EST: gi|352798567|gb|FQ480592.1|FQ480592
EST:     GCTCAGAACTCTTGGGTTGGGAAAGGTGGTGCTTTCACAGGAGAAATCAG                         TGTGGAACAATTGAAAGATATTGGCTGCAACTGGGTTATCCTTGGGCACTC
genomic: GCTCAGAACTCTTGGGTTGGGAAAGGTGGTGCTTTCACAGGAGAAATCAGgttagtttgc ... cctgatgtagTGTGGAACAATTGAAAGATATTGGCTGCAACTGGGTTATCCTTGGGCACTC
EST: gi|161721774|gb|FC070490.1|FC070490
EST:     GCTCAGAACTCTTGGGTTGGGAAAGGTGGTGCTTTCACAGGAGAAATCAG                         TGTGGAACAATTGAAAGATATTGGCTGCAACTGGGTTATCCTTGGGCACTC
genomic: GCTCAGAACTCTTGGGTTGGGAAAGGTGGTGCTTTCACAGGAGAAATCAGgttagtttgc ... cctgatgtagTGTGGAACAATTGAAAGATATTGGCTGCAACTGGGTTATCCTTGGGCACTC
EST: gi|27580521|gb|CB003216.1|CB003216
EST:     GCTCAGAACTCTTGGGTTGGGAAAGGTGGTGCTTTCACAGGAGAAATCAG                         TGTGGAACAATTGAAAGATATTGGCTGCAACTGGGTTATCCTTGGGCACTC
genomic: GCTCAGAACTCTTGGGTTGGGAAAGGTGGTGCTTTCACAGGAGAAATCAGgttagtttgc ... cctgatgtagTGTGGAACAATTGAAAGATATTGGCTGCAACTGGGTTATCCTTGGGCACTC
EST: gi|110713655|gb|EE089776.1|EE089776
EST:     GCTCAGAACTCTTGGGTTGGGAAAGGTGGTGCTTTCACAGGAGAAATCAG                         TGTGGAACAATTGAAAGATATTGGCTGCAACTGGGTTATCCTTGGGCACTC
genomic: GCTCAGAACTCTTGGGTTGGGAAAGGTGGTGCTTTCACAGGAGAAATCAGgttagtttgc ... cctgatgtagTGTGGAACAATTGAAAGATATTGGCTGCAACTGGGTTATCCTTGGGCACTC
EST: gi|351015203|gb|FQ445487.1|FQ445487
EST:     GCTCAGAACTCTTGGGTTGGGAAAGGTGGTGCTTTCACAGGAGAAATCAG                         TGTGGAACAATTGAAAGATATTGGCTGCAACTGGGTTATCCTTGGGCACTC
genomic: GCTCAGAACTCTTGGGTTGGGAAAGGTGGTGCTTTCACAGGAGAAATCAGgttagtttgc ... cctgatgtagTGTGGAACAATTGAAAGATATTGGCTGCAACTGGGTTATCCTTGGGCACTC
EST: gi|351055931|gb|FQ453392.1|FQ453392
EST:     GCTCAGAACTCTTGGGTTGGGAAAGGTGGTGCTTTCACAGGAGAAATCAG                         TGTGGAACAATTGAAAGATATTGGCTGCAACTGGGTTATCCTTGGGCACTC
genomic: GCTCAGAACTCTTGGGTTGGGAAAGGTGGTGCTTTCACAGGAGAAATCAGgttagtttgc ... cctgatgtagTGTGGAACAATTGAAAGATATTGGCTGCAACTGGGTTATCCTTGGGCACTC
EST: gi|161719285|gb|FC068261.1|FC068261
EST:     GCTCAGAACTCTTGGGTTGGGAAAGGTGGTGCTTTCACAGGAGAAATCAG                         TGTGGAACAATTGAAAGATATTGGCTGCAACTGGGTTATCCTTGGGCACTC
genomic: GCTCAGAACTCTTGGGTTGGGAAAGGTGGTGCTTTCACAGGAGAAATCAGgttagtttgc ... cctgatgtagTGTGGAACAATTGAAAGATATTGGCTGCAACTGGGTTATCCTTGGGCACTC
EST: gi|351042327|gb|FQ442794.1|FQ442794
EST:     GCTCAGAACTCTTGGGTTGGGAAAGGTGGTGCTTTCACAGGAGAAATCAG                         TGTGGAACAATTGAAAGATATTGGCTGCAACTGGGTTATCCTTGGGCACTC
genomic: GCTCAGAACTCTTGGGTTGGGAAAGGTGGTGCTTTCACAGGAGAAATCAGgttagtttgc ... cctgatgtagTGTGGAACAATTGAAAGATATTGGCTGCAACTGGGTTATCCTTGGGCACTC
EST: gi|110687322|gb|EE064629.1|EE064629
EST:     GCTCAGAACTCTTGGGTTGGGAAAGGTGGTGCTTTCACAGGAGAAATCAG                         TGTGGAACAATTGAAAGATATTGGCTGCAACTGGGTTATCCTTGGGCACTC
genomic: GCTCAGAACTCTTGGGTTGGGAAAGGTGGTGCTTTCACAGGAGAAATCAGgttagtttgc ... cctgatgtagTGTGGAACAATTGAAAGATATTGGCTGCAACTGGGTTATCCTTGGGCACTC
EST: gi|33406430|gb|CF212057.1|CF212057
EST:     GCTCAGAACTCTTGGGTTGGGAAAGGTGGTGCTTTCACAGGAGAAATCAG                         TGTGGAACAATTGAAAGATATTGGCTGCAACTGGGTTATCCTTGGGCACTC
genomic: GCTCAGAACTCTTGGGTTGGGAAAGGTGGTGCTTTCACAGGAGAAATCAGgttagtttgc ... cctgatgtagTGTGGAACAATTGAAAGATATTGGCTGCAACTGGGTTATCCTTGGGCACTC
EST: gi|161715107|gb|FC064265.1|FC064265
EST:     GCTCAGAACTCTTGGGTTGGGAAAGGTGGTGCTTTCACAGGAGAAATCAG                         TGTGGAACAATTGAAAGATATTGGCTGCAACTGGGTTATCCTTGGGCACTC
genomic: GCTCAGAACTCTTGGGTTGGGAAAGGTGGTGCTTTCACAGGAGAAATCAGgttagtttgc ... cctgatgtagTGTGGAACAATTGAAAGATATTGGCTGCAACTGGGTTATCCTTGGGCACTC
EST: gi|71860392|gb|DT009447.1|DT009447
EST:     CTCAGAACTCTTGGGTTGGGAAAGGTGGTGCTTTCACAGGAGAAATCAAG                         TGTGGAACAATTGAAAGATATTGGCTGCAA
genomic: CTCAGAACTCTTGGGTTGGGAAAGGTGGTGCTTTCACAGGAGAAATCA-Ggttagtttgc ... cctgatgtagTGTGGAACAATTGAAAGATATTGGCTGCAA
EST: gi|351038588|gb|FQ464454.1|FQ464454
EST:     GCTCAGAACTCTTGGGTTGGGAAAGGTGGTGCTTTCACAGGAGAAATCAG                         TGTGGAACAATTGAAAGATATTGGCTGCAACTGGGTTATCCTTGGGCACTC
genomic: GCTCAGAACTCTTGGGTTGGGAAAGGTGGTGCTTTCACAGGAGAAATCAGgttagtttgc ... cctgatgtagTGTGGAACAATTGAAAGATATTGGCTGCAACTGGGTTATCCTTGGGCACTC
EST: gi|30297140|gb|CB973934.1|CB973934
EST:     AAGGTGGTGCTTTCACAGGAGAAATCAG                         TGTGGAACAATTGAAAGATATTGGCTGCAACTGGGTTATCCTTGGGCACTC
genomic: AAGGTGGTGCTTTCACAGGAGAAATCAGgttagtttgc ... cctgatgtagTGTGGAACAATTGAAAGATATTGGCTGCAACTGGGTTATCCTTGGGCACTC
EST: gi|30321727|gb|CD004989.1|CD004989
EST:     GCTCAGAACTCTTGGGTTGGGAAAGGTGGTGCTTTCACAGGAGAAATCAG                         TGTGGAACAATTGAAAGATATTGGCTGCAACTGGGTTATCCTTGGGCACTC
genomic: GCTCAGAACTCTTGGGTTGGGAAAGGTGGTGCTTTCACAGGAGAAATCAGgttagtttgc ... cctgatgtagTGTGGAACAATTGAAAGATATTGGCTGCAACTGGGTTATCCTTGGGCACTC
EST: gi|110684631|gb|EE062130.1|EE062130
EST:     GCTCAGAACTCTTGGGTTGGGAAAGGTGGTGCTTTCACAGGAGAAATCAG                         TGTGGAACAATTGAAAGATATTGGCTGCAACTGGGTTATCCTTGGGCACTC
genomic: GCTCAGAACTCTTGGGTTGGGAAAGGTGGTGCTTTCACAGGAGAAATCAGgttagtttgc ... cctgatgtagTGTGGAACAATTGAAAGATATTGGCTGCAACTGGGTTATCCTTGGGCACTC
EST: gi|351044839|gb|FQ449093.1|FQ449093
EST:     GCTCAGAACTCTTGGGTTGGGAAAGGTGGTGCTTTCACAGGAGAAATCAG                         TGTGGAACAATTGAAAGATATTGGCTGCAACTGGGTTATCCTTGGGCACTC
genomic: GCTCAGAACTCTTGGGTTGGGAAAGGTGGTGCTTTCACAGGAGAAATCAGgttagtttgc ... cctgatgtagTGTGGAACAATTGAAAGATATTGGCTGCAACTGGGTTATCCTTGGGCACTC
EST: gi|27578848|gb|CB001543.1|CB001543
EST:     GCTCAGAACTCTTGGGTTGGGAAAGGTGGTGCTTTCACAGGAGAAATCAG                         TGTGGAACAATTGAAAGATATTGGCTGCAACTGGGTTATCCTTGGGCACTC
genomic: GCTCAGAACTCTTGGGTTGGGAAAGGTGGTGCTTTCACAGGAGAAATCAGgttagtttgc ... cctgatgtagTGTGGAACAATTGAAAGATATTGGCTGCAACTGGGTTATCCTTGGGCACTC
EST: gi|110705429|gb|EE082267.1|EE082267
EST:     GCTCAGAACTCTTGGGTTGGGAAAGGTGGTGCTTTCACAGGAGAAATCAG                         TGTGGAACAATTGAAAGATATTGGCTGCAACTGGGTTATCCTTGGGCACTC
genomic: GCTCAGAACTCTTGGGTTGGGAAAGGTGGTGCTTTCACAGGAGAAATCAGgttagtttgc ... cctgatgtagTGTGGAACAATTGAAAGATATTGGCTGCAACTGGGTTATCCTTGGGCACTC
EST: gi|294966365|gb|GW837616.1|GW837616
EST:     GCTCAGAACTCTTGGGTTGGGAAAGGTGGTGCTTTCACAGGAGAAATCAG                         TGTGGAACAATTGAAAGATATTGGCTGCAACTGGGTTATCCTTGGGCACTC
genomic: GCTCAGAACTCTTGGGTTGGGAAAGGTGGTGCTTTCACAGGAGAAATCAGgttagtttgc ... cctgatgtagTGTGGAACAATTGAAAGATATTGGCTGCAACTGGGTTATCCTTGGGCACTC
EST: gi|110720871|gb|EE097170.1|EE097170
EST:     GCTCAGAACTCTTGGGTTGGGAAAGGTGGTGCTTTCACAGGAGAAATCAG                         TGTGGAACAATTGAAAGATATTGGCTGCAACTGGGTTATCCTTGGGCACTC
genomic: GCTCAGAACTCTTGGGTTGGGAAAGGTGGTGCTTTCACAGGAGAAATCAGgttagtttgc ... cctgatgtagTGTGGAACAATTGAAAGATATTGGCTGCAACTGGGTTATCCTTGGGCACTC
EST: gi|352790810|gb|FQ478533.1|FQ478533
EST:     GCTCAGAACTCTTGGGTTGGGAAAGGTGGTGCTTTCACAGGAGAAATCAG                         TGTGGAACAATTGAAAGATATTGGCTGCAACTGGGTTATCCTTGGGCACTC
genomic: GCTCAGAACTCTTGGGTTGGGAAAGGTGGTGCTTTCACAGGAGAAATCAGgttagtttgc ... cctgatgtagTGTGGAACAATTGAAAGATATTGGCTGCAACTGGGTTATCCTTGGGCACTC
EST: gi|56408461|gb|CX016713.1|CX016713
EST:     GCTCAGAACTCTTGGGTTGGGAAAGGTGGTGCTTTCACAGGAGAAATCAG                         TGTGGAACAATTGAAAGATATTGGCTGCAACTGGGTTATCCTTGGGCACTC
genomic: GCTCAGAACTCTTGGGTTGGGAAAGGTGGTGCTTTCACAGGAGAAATCAGgttagtttgc ... cctgatgtagTGTGGAACAATTGAAAGATATTGGCTGCAACTGGGTTATCCTTGGGCACTC
EST: gi|351036824|gb|FQ459346.1|FQ459346
EST:     GCTCAGAACTCTTGGGTTGGGAAAGGTGGTGCTTTCACAGGAGAAATCAG                         TGTGGAACAATTGAAAGATATTGGCTGCAACTGGGTTATCCTTGGGCACTC
genomic: GCTCAGAACTCTTGGGTTGGGAAAGGTGGTGCTTTCACAGGAGAAATCAGgttagtttgc ... cctgatgtagTGTGGAACAATTGAAAGATATTGGCTGCAACTGGGTTATCCTTGGGCACTC
EST: gi|71862083|gb|DT011138.1|DT011138
EST:     GCTCAGAACTCTTGGGTTGGGAAAGGTGGTGCTTTCACAGGAGAAATCAG                         TGTGGAACAATTGAAAGATATTGGCTGCAACTGGGTTATCCTT
genomic: GCTCAGAACTCTTGGGTTGGGAAAGGTGGTGCTTTCACAGGAGAAATCAGgttagtttgc ... cctgatgtagTGTGGAACAATTGAAAGATATTGGCTGCAACTGGGTTATCCTT
EST: gi|110721976|gb|EE097800.1|EE097800
EST:     GCTCAGAACTCTTGGGTTGGGAAAGGTGGTGCTTTCACAGGAGAAATCAG                         TGTGGAACAATTGAAAGATATTGGCTGCAACTGGGTTATCCTTGGGCACTC
genomic: GCTCAGAACTCTTGGGTTGGGAAAGGTGGTGCTTTCACAGGAGAAATCAGgttagtttgc ... cctgatgtagTGTGGAACAATTGAAAGATATTGGCTGCAACTGGGTTATCCTTGGGCACTC

Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
TTTACCTTGACCAGGTAAAGAATTCATTAACAGATCGGATTGAGATATCTGCTCAGAACTCTTGGGTTGGGAAAGGTGGTGCTTTCACAGGAGAAATCAGgttagtttgctccttcttgttaattaccaaaaaagaacaaagttgtttcacagttttctaatacttaaaagaatttagcttttccttttttcttgtgcta

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGGAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  GGAGAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -ctccttc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - aaaagaa