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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GAAATGCAGTGCCAGGAGTCTCCAGCCCATCAAAGCCACAGCCACAGAATTGCCTCCTACAGTTCAAAgtaagaactacatattcatgtttagtttttatgtgatactctttcaatttggataattagctgtattagttgatattcttgagtgttttgtgtag

Basic information

species Vitis vinifera
transcript Vv19s0085g00600.t01
intron # 3
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|71863317|gb|DT012372.1|DT012372
EST:     TCTCCAGCCCATCAAAGCCACAGCCACAGAATTACCTCCTACAGTTCAAA                         AGTCATGGAGCAGTGGGCAGACAAAGATTGGAATCAATG
genomic: TCTCCAGCCCATCAAAGCCACAGCCACAGAATTGCCTCCTACAGTTCAAAgtaagaacta ... ttttgtgtagAGTCATGGAGCAGTGGGCAGACAAAGATTGGAATCAATG