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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GAAATTAAAGTTCTCCATCATTTAAAGCATCCAAATATTGTGCAGTACTATGGCAGTGAAATTgtaaatatttgcttggtccctattagtctgtaatggtcaaatttgacttattaaagatctttcacaaactggtttatgcgcag

Basic information

species Vitis vinifera
transcript Vv18s0001g11240.t01
intron # 3
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: Vv18s0001g11240.t01 (Vitis vinifera), 5'ss of exon 3
lower sequence: GRMZM2G156800_T02 (Zea mays), 5'ss of exon 4
GAAATTAAAGTTCTCCATCATTTAAAGCATCCAAATATTGTGCAGTACTATGGCAGTGAAATTgtaaatatttgcttggtccctattagtctgtaatggtcaaatttgacttattaaagatctttcacaaactggtttatgcgcag
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GAAATTAAGTTTCTTAGTCAATTTAAGCATGAAAATATTGTGCAGTACTATGGCAGTGAAACTgtaagttctcctttgtcacttaagtagccttagtacttactttccagtgctttgtaatggttgtttattcaaatcttgcag--