1 5' 3' | 2 5' 3' | 3 5' 3' |
AGAATGGTGATGTCTCTGTCATCGGATAAAGCTGTTTGGGATGCTATATTGAACAACAAGATGGTGAGGAAGCTCCAGGAGCCACTCTGTACAGgtttggattgagccaaatggatctttctttcattgtttatgctcacatttgatttgcattagattcaagccttccaaaacaaaaccgattgtgtgtactt...
species | Vitis vinifera |
transcript | Vv15s0021g02210.t01 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: TATATTGAACAACAAGATGGTGAGGAAGCTCCAGGAGCCGCTCTGTACAG CTGAAGAGGAAAGTTCACAGAGCTCCAGTGAGGAACCGGACTTGGCCACACEST: gi|51050130|gb|CO818395.1|CO818395
genomic: TATATTGAACAACAAGATGGTGAGGAAGCTCCAGGAGCCACTCTGTACAGgtttggattg ... atccatgcagCTGAAGAGGAAAGTTCACAGAGCTCCAGTGAGGAACCGGACTTGGCCACAT
EST: TATA-TGAACAACAAGATGGTGA-GAAGCTCCAGGAGCCACTCTGTACAG CTGAAGAGGAAAGTTCACAGAGCTCCAGTGAGGAACCGGACTTGGCCACAT
genomic: TATATTGAACAACAAGATGGTGAGGAAGCTCCAGGAGCCACTCTGTACAGgtttggattg ... atccatgcagCTGAAGAGGAAAGTTCACAGAGCTCCAGTGAGGAACCGGACTTGGCCACAT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AGAATGGTGATGTCTCTGTCATCGGATAAAGCTGTTTGGGATGCTATATTGAACAACAAGATGGTGAGGAAGCTCCAGGAGCCACTCTGTACAGgtttggattgagccaaatggatctttctttcattgtttatgctcacatttgatttgcattagattcaagccttccaaaacaaaaccgattgtgtgtactt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGATG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - aaatgga
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - aaacaaa