1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
ATTGTACAAGGGCATTGTTCCTCTCTGGGGACGTCAGATTCCATgtaagttgaggcatcttgttaagttatttatcttttatttttttggtctattgcataagaatattcattaaccaatgtagtgtgcttgctcatgatgact...
species | Vitis vinifera |
transcript | Vv14s0068g01260.t01 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: ATTGTACAAGGGCATTGTTCCTCTCTGGGGACGTCAGATTCCAT ATACAATGATGAAATTTGATTCTTTTGAGACTATTGTTGAGATGCTTTACAEST: gi|110366072|gb|EC929727.1|EC929727
genomic: ATTGTACAAGGGCATTGTTCCTCTCTGGGGACGTCAGATTCCATgtaagttgag ... ttttgtgcagATACAATGATGAAATTTGCTTCTTTTGAGACTATTGTTGAGATGCTTTACA
EST: ATTGTACAAGGGCATTGTTCCTCTCTGGGGACGTCAGATTCCAT ATACAATGATGAAATTTGCTTCTTTTGAGACTATTGTTGAGATGCTTTACAEST: gi|110707594|gb|EE084171.1|EE084171
genomic: ATTGTACAAGGGCATTGTTCCTCTCTGGGGACGTCAGATTCCATgtaagttgag ... ttttgtgcagATACAATGATGAAATTTGCTTCTTTTGAGACTATTGTTGAGATGCTTTACA
EST: ATTGTACAAGGGCATTGTTCCTCTCTGGGGACGTCCGATTCCCT ATACAATGATGAAATTTGCTTCCTTTTGAEST: gi|71865829|gb|DT014884.1|DT014884
genomic: ATTGTACAAGGGCATTGTTCCTCTCTGGGGACGTCAGATTCCATgtaagttgag ... ttttgtgcagATACAATGATGAAATTTGCTTC-TTTTGA
EST: ATTGTACAAGGGCATTGTTCCTCTCTGGGGACGTCAGATTCCAT ATACAATGATGAAATTTGCTTCTTTTGAGACTATEST: gi|110685233|gb|EE063420.1|EE063420
genomic: ATTGTACAAGGGCATTGTTCCTCTCTGGGGACGTCAGATTCCATgtaagttgag ... ttttgtgcagATACAATGATGAAATTTGCTTCTTTTGAGACTAT
EST: ATTGTACAAGGGCATTGTTCCTCTCTGGGGACGTCAGATTCCAT ATACAATGATGAAATTTGCTTCTTTTGAGACTATTGTTGAGATGCTTTACAEST: gi|110379440|gb|EC944634.1|EC944634
genomic: ATTGTACAAGGGCATTGTTCCTCTCTGGGGACGTCAGATTCCATgtaagttgag ... ttttgtgcagATACAATGATGAAATTTGCTTCTTTTGAGACTATTGTTGAGATGCTTTACA
EST: ATTGTACAAGGGCATTGTTCCTCTCTGGGGACGTCAGATTCCAT ATACAATGATGAAATTTGCTTCTTTTGAGACTATTGTTGAGATGCTTTACA
genomic: ATTGTACAAGGGCATTGTTCCTCTCTGGGGACGTCAGATTCCATgtaagttgag ... ttttgtgcagATACAATGATGAAATTTGCTTCTTTTGAGACTATTGTTGAGATGCTTTACA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATTGTACAAGGGCATTGTTCCTCTCTGGGGACGTCAGATTCCATgtaagttgaggcatcttgttaagttatttatcttttatttttttggtctattgcataagaatattcattaaccaatgtagtgtgcttgctcatgatgact
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - aagaata