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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

AGTGCAATCTTGGGCGGCAATAGTGATGGGAATACTTTCCGGCAGCATTCCATGGGTGTCCATGATGATCCTTCATAAAAAGTCCAAATTACTACAAAAGgtatatagtattgtttcacacccagccctttaattttcatactgttactacatattatacatcttcgtcatatacctctagtgcatatgtccacacaatt...

Basic information

species Vitis vinifera
transcript Vv08s0058g00150.t01
intron # 3
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|33404627|gb|CF210254.1|CF210254
EST:     CATGGGTGTCCATGATGATCCTTCATAAAAAGTCCAAATTACTACAAAAG                         GTTGACGACACACTAGGTGTATTTCACACGCATGCAGTGGCGGGACTGTTG
genomic: CATGGGTGTCCATGATGATCCTTCATAAAAAGTCCAAATTACTACAAAAGgtatatagta ... tggtgtgtagGTTGACGACACACTAGGTGTATTTCACACGCATGCAGTGGCGGGACTGTTG