1 5' 3' | 2 5' 3' | 3 5' 3' |
GCGCGTGCAAAACATGATACAACAAATACAGTTGTTGCGGGGTGTGTTACTGGGGGTGCAATATCAGCAAAAGgtaactttttttttttttcatcatctggttcatttttgggccaagaagtttatgagggcatggaaactgtgttcttttaaaacctattgctgatctgcat...
species | Vitis vinifera |
transcript | Vv06s0004g07140.t01 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: AAATACAGTTGTTGCGGGGTGTGTTACTGGGGGTGCAATATCAGCAAAAG GCGGTCCAAAAGCGGCTTGTGTTGGTTGTGCTGGCTTTGCAACATTCTCAGEST: gi|110385470|gb|EC950002.1|EC950002
genomic: AAATACAGTTGTTGCGGGGTGTGTTACTGGGGGTGCAATATCAGCAAAAGgtaacttttt ... gtgtctctagGCGGTCCAAAAGCGGCTTGTGTTGGTTGTGCTGGCTTTGCAACATTCTCAG
EST: AAATACAGTTGTTGCGGGGTGTGTTACCGGGGGTGCAATATCAGCAAAAG GCGGTCCAAAAGCGGCTTGTGTTGGTTGTGCTGGCTTTGCAACATTCTCAG
genomic: AAATACAGTTGTTGCGGGGTGTGTTACTGGGGGTGCAATATCAGCAAAAGgtaacttttt ... gtgtctctagGCGGTCCAAAAGCGGCTTGTGTTGGTTGTGCTGGCTTTGCAACATTCTCAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GCGCGTGCAAAACATGATACAACAAATACAGTTGTTGCGGGGTGTGTTACTGGGGGTGCAATATCAGCAAAAGgtaactttttttttttttcatcatctggttcatttttgggccaagaagtttatgagggcatggaaactgtgttcttttaaaacctattgctgatctgcat
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - aagaagt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -atggaaa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - aaaaccta