1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
CGTTGGTGGTGGTGTTATTGGTGACATGTGTGGATTTGCTGCTGCTGCCTTCCTTCGTGGTGTTAATTTCATTCAGATTCCTACAACTGTAATGGCACAGgtatgtcttaaatcacagcacctttttagctggctcttgctccctttgcatgcttcaggtgtacaagggctggacaccttctttcttaggtgctcctaat...
species | Vitis vinifera |
transcript | Vv04s0023g03820.t01 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: TCCTTCGTGGTGTTAATTTCATTCAGATTCCTACAACTGTAATGGCACAG GTGGATTCTTCAGTTGGAGGCAAAACTGGCATAAACCATCCTCTAGGAAAAEST: gi|110700156|gb|EE077872.1|EE077872
genomic: TCCTTCGTGGTGTTAATTTCATTCAGATTCCTACAACTGTAATGGCACAGgtatgtctta ... ttttttctagGTGGATTCTTCAGTTGGAGGCAAAACTGGCATAAACCATCCTCTAGGAAAA
EST: TCCTTCGTGGTGTTAATTTCATTCAGATTCCTACAACTGTAATGGCACAG GTGGATTCTTCAGTTGGAGGCAAAACTGGCATAAACCATCCTCTAGGAAAAEST: gi|110369125|gb|EC933271.1|EC933271
genomic: TCCTTCGTGGTGTTAATTTCATTCAGATTCCTACAACTGTAATGGCACAGgtatgtctta ... ttttttctagGTGGATTCTTCAGTTGGAGGCAAAACTGGCATAAACCATCCTCTAGGAAAA
EST: TCCTTCGTGGTGTTAATTTCATTCAGATTCCTACAACTGTAATGGCACAG GTGGATTCTTCAGTTGGAGGCAAAACTGGCATAAACCATCCTCTAGGAAAAEST: gi|71890445|gb|DT039500.1|DT039500
genomic: TCCTTCGTGGTGTTAATTTCATTCAGATTCCTACAACTGTAATGGCACAGgtatgtctta ... ttttttctagGTGGATTCTTCAGTTGGAGGCAAAACTGGCATAAACCATCCTCTAGGAAAA
EST: TCCTTCGTGGTGTTAATTTCATTCAGATTCCTACAACTGTAATGGCACAG GTGGATTCTTCAGTTGGAGGCAAAACTGGCATAAACCATCCTCTAGGAAAA
genomic: TCCTTCGTGGTGTTAATTTCATTCAGATTCCTACAACTGTAATGGCACAGgtatgtctta ... ttttttctagGTGGATTCTTCAGTTGGAGGCAAAACTGGCATAAACCATCCTCTAGGAAAA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CGTTGGTGGTGGTGTTATTGGTGACATGTGTGGATTTGCTGCTGCTGCCTTCCTTCGTGGTGTTAATTTCATTCAGATTCCTACAACTGTAATGGCACAGgtatgtcttaaatcacagcacctttttagctggctcttgctccctttgcatgcttcaggtgtacaagggctggacaccttctttcttaggtgctcctaat
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