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TTGCCTCTTTGTGTGCTACGACTTAATTCGTCCAGACATTGCTCTTGAACTTGCCTGGATTAACAATATGGTTGACTTTGCCTTGCCATATCTGTTGCAGgtgatctgtttgcttcttcccttgtcattctcatatattaggaattttaggagggaaattagcttgcgactttcccagcctgtgggccttttttagagct...
species | Vitis vinifera |
transcript | Vv13s0067g01290.t01 |
intron # | 28 |
splice site | 5' |
intron type | U2 |
EST: TTGCCTGGATTAACAATATGGTTGACTTTGCCTTGCCATATCTGTTGCAG TTTATCCGCGAGTACGCAGGCAAAGTTGATGAACTTGEST: gi|161720108|gb|FC066740.1|FC066740
genomic: TTGCCTGGATTAACAATATGGTTGACTTTGCCTTGCCATATCTGTTGCAGgtgatctgtt ... tttctttcagTTTATCCGCGAGTACGCAGGCAAAGTTGATGAACTTG
EST: TTGCCTGGATTAACAATATGGTTGACTTTGCCTTGCCATATCTGTTGCAG TTTATCCGCGAGTACGCAGGCAAAGTTGATGAACTTGTTAAGGACAAGCTGEST: gi|30128782|gb|CB914121.1|CB914121
genomic: TTGCCTGGATTAACAATATGGTTGACTTTGCCTTGCCATATCTGTTGCAGgtgatctgtt ... tttctttcagTTTATCCGCGAGTACGCAGGCAAAGTTGATGAACTTGTTAAGGACAAGCTG
EST: TTGCCTGGATTAACAATATGGTTGACTTTGCCTTGCCATATCTGTTGCAG TTTATCCGCGAGTACGCAGGCAAAGTTGATGAACTTGTTAAGGACAAGCTGEST: gi|30136332|gb|CB921670.1|CB921670
genomic: TTGCCTGGATTAACAATATGGTTGACTTTGCCTTGCCATATCTGTTGCAGgtgatctgtt ... tttctttcagTTTATCCGCGAGTACGCAGGCAAAGTTGATGAACTTGTTAAGGACAAGCTG
EST: TTGCCTGGATTAACAATATGGTTGACTTTGCCTTGCCATATCTGTTGCAG TTTATCCGCGAGTACGCAGGCAAAGTTGATGAACTTGTTAAGGACAAGCTGEST: gi|294964474|gb|GW838277.1|GW838277
genomic: TTGCCTGGATTAACAATATGGTTGACTTTGCCTTGCCATATCTGTTGCAGgtgatctgtt ... tttctttcagTTTATCCGCGAGTACGCAGGCAAAGTTGATGAACTTGTTAAGGACAAGCTG
EST: TTGCCTGGATTAACAATATGGTTGACTTTGCCTTGCCATATCTGTTGCAG TTTATCCGCGAGTACGCAGGCAAAGTTGATGAACTTGTTAAGGACAAGCTGEST: gi|33402568|gb|CF208195.1|CF208195
genomic: TTGCCTGGATTAACAATATGGTTGACTTTGCCTTGCCATATCTGTTGCAGgtgatctgtt ... tttctttcagTTTATCCGCGAGTACGCAGGCAAAGTTGATGAACTTGTTAAGGACAAGCTG
EST: TTGCCTGGATTAACAATATGGTTGACTTTGCCTTGCCATATCTGTTGCAG TTTATCCGCGAGTACGCAGGCAAAGTTGATGAACTTGTTAAGGACAAGCTG
genomic: TTGCCTGGATTAACAATATGGTTGACTTTGCCTTGCCATATCTGTTGCAGgtgatctgtt ... tttctttcagTTTATCCGCGAGTACGCAGGCAAAGTTGATGAACTTGTTAAGGACAAGCTG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TTGCCTCTTTGTGTGCTACGACTTAATTCGTCCAGACATTGCTCTTGAACTTGCCTGGATTAACAATATGGTTGACTTTGCCTTGCCATATCTGTTGCAGgtgatctgtttgcttcttcccttgtcattctcatatattaggaattttaggagggaaattagcttgcgactttcccagcctgtgggccttttttagagct
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - tcttccc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -agggaaa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -ctttccc