1 5' 3' | 2 5' 3' |
CTACCAAGGTAGGGCACCCAAAGGCAAAAAGACTGACTGGGTCATGCATGAGTTTCGCCTCCAAGGCCCTCTCACCCCACCTGCCATTCCTTCTCTCAAGgtacctcttctctctatttatccctgttctccaaaaatattgatgaactaatttgtataggcattacttatacataatattattatatataggagttgta...
species | Vitis vinifera |
transcript | Vv19s0027g00230.t01 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: CGCCTCCAAAGCCCTCTCACCCCACCTGCCATTCCTTCTCTCAAG GAAGATTGGGTTCTATGTAGAGTGTTCAACAAAAGTAGATCATAAGCAGCAEST: gi|161713712|gb|FC063743.1|FC063743
genomic: CGCCTCCAAGGCCCTCTCACCCCACCTGCCATTCCTTCTCTCAAGgtacctcttc ... taacctgcagGAAGATTGGGTTCTATGTAGAGTGTTCAACAAAAGTAGATCAGAAGCAGCA
EST: AGTTTCGCCTCCAAGGCCCTCTCACCCCACCTGCCATTCCTTCTCTCAAG GAAGATTGGGTTCTATGTAGAGTGTTCAACAAAAGTAGATCAGAAGCAGCA
genomic: AGTTTCGCCTCCAAGGCCCTCTCACCCCACCTGCCATTCCTTCTCTCAAGgtacctcttc ... taacctgcagGAAGATTGGGTTCTATGTAGAGTGTTCAACAAAAGTAGATCAGAAGCAGCA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CTACCAAGGTAGGGCACCCAAAGGCAAAAAGACTGACTGGGTCATGCATGAGTTTCGCCTCCAAGGCCCTCTCACCCCACCTGCCATTCCTTCTCTCAAGgtacctcttctctctatttatccctgttctccaaaaatattgatgaactaatttgtataggcattacttatacataatattattatatataggagttgta
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - aaaaata