Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|110730151|gb|EE106899.1|EE106899EST: CGATGTCAAGCTTGGGCAGGAGTATGAGCTGGTCGTCACCACTTATGCCG GGCTGTATAGGTATAGAGTAGGAGATGTGCTCCGTGTGGCCGGATTCAAGA
genomic: CGATGTCAAGCTTGGGCAGGAGTATGAGCTGGTCGTCACCACTTATGCCGgtcagttgcc ... gatgctgcagGGCTGTATAGGTATAGAGTAGGAGATGTGCTCCGTGTGGCCGGATTCAAGA
EST:
gi|30295779|gb|CB972573.1|CB972573EST: GATGTCAAGCTTGGGCAGGAGTATG-GANTGGTCGTCACCACTTATGCCG GGCTGTATAGGTAT
genomic: GATGTCAAGCTTGGGCAGGAGTATGAGC-TGGTCGTCACCACTTATGCCGgtcagttgcc ... gatgctgcagGGCTGTATAGGTAT
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
GTCCCCAAATCCCTCAATGACAAGGAGCAACAAGACTTGGTCGATCTCGTCGATGTCAAGCTTGGGCAGGAGTATGAGCTGGTCGTCACCACTTATGCCGgtcagttgcccgacataattgacttaatttttttcatttgtctttcaaatgtatgctgatatatatgtcatgaacttgatgctgcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - CAAGCT