1 5' 3' | 2 5' 3' | 3 5' 3' |
GCGGTGGCTGCGGATCGTTGCTCAGgtgagttttcttttacgttcctgcgtttaataggcaaccaaacagaggcaaaccttattaaaccatcccttttcattcggcaatgagtagatctgctaat...
species | Vitis vinifera |
transcript | Vv18s0001g12240.t01 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: GGCGGTGGCTGCGGATCGTTGCTCAG GTAAATCGGTTAGCTTCCACAGTTAGTACCGTACTTACAATGGCAGATGGTEST: gi|352776706|gb|FQ465504.1|FQ465504
genomic: GGCGGTGGCTGCGGATCGTTGCTCAGgtgagttttc ... ttctttgcagGTAAATCAGTTAGCTTCCACAGTTAGTACCGTACTTACAATGGCAGATGGT
EST: GGCGGTGGCTGCGGATCGTTGCTCAG GTAAATCAGTTAGCTTCCACAGTTAGTACCGTACTTACAATGGCAGATGGTEST: gi|254917248|gb|GR906074.1|GR906074
genomic: GGCGGTGGCTGCGGATCGTTGCTCAGgtgagttttc ... ttctttgcagGTAAATCAGTTAGCTTCCACAGTTAGTACCGTACTTACAATGGCAGATGGT
EST: GGCGGTGGCTGCGGATCGTTGCTCAG GTAAATCGGTTAGCTTCCACAGTTAGTACCGTACTTACAATGGCAGATGGT
genomic: GGCGGTGGCTGCGGATCGTTGCTCAGgtgagttttc ... ttctttgcagGTAAATCAGTTAGCTTCCACAGTTAGTACCGTACTTACAATGGCAGATGGT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GCGGTGGCTGCGGATCGTTGCTCAGgtgagttttcttttacgttcctgcgtttaataggcaaccaaacagaggcaaaccttattaaaccatcccttttcattcggcaatgagtagatctgctaat
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- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ccatccc