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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

AACAGCAGAAGAAATGGCATCAGATCCGAAGATTCACTTGTTCGAAGAGGTCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAGgtcagatcttaatcgattcgtttttgttctttccgaatcggttttcttaatagtttggttgtcgggaaaaccgaggaaagtgatagaaaatgaaattatg...

Basic information

species Vitis vinifera
transcript Vv16s0098g01230.t01
intron # 2
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|87586546|gb|DY474780.1|DY474780
EST:     TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAG                         GTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTT
genomic: TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAGgtcagatctt ... attgtaacagGTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTT
EST: gi|110358753|gb|EC923202.1|EC923202
EST:     TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAG                         GTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTT
genomic: TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAGgtcagatctt ... attgtaacagGTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTT
EST: gi|29782440|gb|CB347747.2|CB347747
EST:     TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAG                         GTGTATGATGTAACTCCGTTCATGGATGATCGTCCTGGAGGTGATGAAGTT
genomic: TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAGgtcagatctt ... attgtaacagGTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTT
EST: gi|77587975|gb|DV223193.1|DV223193
EST:     TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAG                         GTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTT
genomic: TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAGgtcagatctt ... attgtaacagGTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTT
EST: gi|110717957|gb|EE094270.1|EE094270
EST:     TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAG                         GTGTATGATGTAACTCCATTCATGGATGATCATCCTGGAGGCGATGAAGTT
genomic: TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAGgtcagatctt ... attgtaacagGTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTT
EST: gi|71870722|gb|DT019777.1|DT019777
EST:     TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAG                         GTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTT
genomic: TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAGgtcagatctt ... attgtaacagGTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTT
EST: gi|110689966|gb|EE066652.1|EE066652
EST:     TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAG                         GTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTT
genomic: TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAGgtcagatctt ... attgtaacagGTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTT
EST: gi|110367767|gb|EC931718.1|EC931718
EST:     TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAG                         GTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTT
genomic: TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAGgtcagatctt ... attgtaacagGTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTT
EST: gi|30130798|gb|CB916137.1|CB916137
EST:     TCGCCGAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAG                         GTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTT
genomic: TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAGgtcagatctt ... attgtaacagGTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTT
EST: gi|71881461|gb|DT030516.1|DT030516
EST:     TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAG                         GTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTT
genomic: TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAGgtcagatctt ... attgtaacagGTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTT
EST: gi|32267439|gb|CD716402.1|CD716402
EST:     TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAG                         GTGTATGATGTAACTCCATTCATGGATGATCATCCTGGAGGCGATGAAGTT
genomic: TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAGgtcagatctt ... attgtaacagGTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTT
EST: gi|27586308|gb|CB009003.1|CB009003
EST:     TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAG                         GTGTATGATGTAACTCCATTCATGGATGATCATCCTGGAGGCGATGAAGTT
genomic: TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAGgtcagatctt ... attgtaacagGTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTT
EST: gi|110425614|gb|EC992003.1|EC992003
EST:     GCTGGCTGGTTATTTCCGGAAAG                         GTGTATGATGTAACTCCATTCATGGATGATCATCCTGGAGGCGATGAAGTT
genomic: GCTGGCTGGTTATTTCCGGAAAGgtcagatctt ... attgtaacagGTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTT
EST: gi|30124888|gb|CB910227.1|CB910227
EST:     TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAG                         GTGTATGATGTAACTCCATTCATGGATGATCATCCTGGAGGCGATGAAGTT
genomic: TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAGgtcagatctt ... attgtaacagGTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTT
EST: gi|26257451|gb|CA808514.1|CA808514
EST:     TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAG                         GTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTT
genomic: TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAGgtcagatctt ... attgtaacagGTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTT
EST: gi|110386300|gb|EC950883.1|EC950883
EST:     TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAG                         GTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTT
genomic: TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAGgtcagatctt ... attgtaacagGTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTT
EST: gi|77584695|gb|DV221422.1|DV221422
EST:     TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAG                         GTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTT
genomic: TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAGgtcagatctt ... attgtaacagGTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTT
EST: gi|110389944|gb|EC954819.1|EC954819
EST:     TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAG                         GTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTT
genomic: TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAGgtcagatctt ... attgtaacagGTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTT
EST: gi|110399179|gb|EC965672.1|EC965672
EST:     TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAG                         GTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTT
genomic: TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAGgtcagatctt ... attgtaacagGTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTT
EST: gi|71877757|gb|DT026812.1|DT026812
EST:     TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAG                         GTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTT
genomic: TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAGgtcagatctt ... attgtaacagGTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTT
EST: gi|37185114|gb|CF604467.1|CF604467
EST:     TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAG                         GTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTT
genomic: TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAGgtcagatctt ... attgtaacagGTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTT
EST: gi|110399826|gb|EC966356.1|EC966356
EST:     TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAG                         GTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTT
genomic: TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAGgtcagatctt ... attgtaacagGTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTT
EST: gi|26267103|gb|CA818166.1|CA818166
EST:     TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAG                         GTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTT
genomic: TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAGgtcagatctt ... attgtaacagGTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTT
EST: gi|26258230|gb|CA809293.1|CA809293
EST:     TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAG                         GTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTT
genomic: TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAGgtcagatctt ... attgtaacagGTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTT
EST: gi|83276424|gb|DV940432.1|DV940432
EST:     TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAG                         GTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTT
genomic: TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAGgtcagatctt ... attgtaacagGTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTT
EST: gi|18458899|gb|BM437177.1|BM437177
EST:     TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAG                         GTGTATGATGTAACTCCATTCATGGATGATCATCCTGGAGGCGATGAAGTT
genomic: TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAGgtcagatctt ... attgtaacagGTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTT
EST: gi|71877853|gb|DT026908.1|DT026908
EST:     TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAG                         GTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTT
genomic: TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAGgtcagatctt ... attgtaacagGTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTT
EST: gi|71866886|gb|DT015941.1|DT015941
EST:     TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAG                         GTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTT
genomic: TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAGgtcagatctt ... attgtaacagGTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTT
EST: gi|110414524|gb|EC980358.1|EC980358
EST:     TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAG                         GTGTATGATGTAACTCCATTCATGGATGATCATCCTGGAGGCGATGAAGTT
genomic: TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAGgtcagatctt ... attgtaacagGTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTT
EST: gi|27583746|gb|CB006441.1|CB006441
EST:     TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAG                         GTGTATGATGTAACTCCATTCATGGATGATCATCCTGGAGGCGATGAAGTT
genomic: TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAGgtcagatctt ... attgtaacagGTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTT
EST: gi|71878990|gb|DT028045.1|DT028045
EST:     TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAG                         GTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTT
genomic: TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAGgtcagatctt ... attgtaacagGTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTT
EST: gi|30301030|gb|CB977824.1|CB977824
EST:     TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAG                         GTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTT
genomic: TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAGgtcagatctt ... attgtaacagGTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTT
EST: gi|110363128|gb|EC926699.1|EC926699
EST:     TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAG                         GTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTT
genomic: TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAGgtcagatctt ... attgtaacagGTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTT
EST: gi|32460944|gb|CD802118.1|CD802118
EST:     GCCAAGCATAATCAGACCAAAGATTGCTGTGGCTGG-TATTTCCGGAAAG                         GTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTT
genomic: GCCAAGCATAATCAGACCAAAGATTGC--TGGCTGGTTATTTCCGGAAAGgtcagatctt ... attgtaacagGTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTT
EST: gi|77586272|gb|DV222235.1|DV222235
EST:     TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAG                         GTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTT
genomic: TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAGgtcagatctt ... attgtaacagGTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTT
EST: gi|110387623|gb|EC952306.1|EC952306
EST:     TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAG                         GTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTT
genomic: TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAGgtcagatctt ... attgtaacagGTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTT
EST: gi|30130934|gb|CB916273.1|CB916273
EST:     TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAG                         GTGTATGATGTAACTCCATTCATGGATGATCATCCTGGAGGCGATGAAGTT
genomic: TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAGgtcagatctt ... attgtaacagGTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTT
EST: gi|110392196|gb|EC957443.1|EC957443
EST:     TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAG                         GTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTT
genomic: TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAGgtcagatctt ... attgtaacagGTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTT
EST: gi|110383452|gb|EC947825.1|EC947825
EST:     TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAG                         GTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTT
genomic: TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAGgtcagatctt ... attgtaacagGTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTT
EST: gi|110406623|gb|EC972203.1|EC972203
EST:     TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAG                         GTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTT
genomic: TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAGgtcagatctt ... attgtaacagGTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTT
EST: gi|110721176|gb|EE097878.1|EE097878
EST:     TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAG                         GTGTATGATGTAACTCCATTCATGGATGATCATCCTGGAGGCGATGAAGTT
genomic: TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAGgtcagatctt ... attgtaacagGTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTT
EST: gi|51051681|gb|CO819178.1|CO819178
EST:     TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAG                         GTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTT
genomic: TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAGgtcagatctt ... attgtaacagGTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTT
EST: gi|71880427|gb|DT029482.1|DT029482
EST:     TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAG                         GTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTT
genomic: TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAGgtcagatctt ... attgtaacagGTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTT
EST: gi|32245206|gb|CD711025.1|CD711025
EST:     TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAG                         GTGTATGATGTAACTCCATTCATGGATGATCATCCTGGAGGCGATGAAGTT
genomic: TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAGgtcagatctt ... attgtaacagGTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTT
EST: gi|30130828|gb|CB916167.1|CB916167
EST:     TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAG                         GTGTATGATGTAACTCCATTCATGGATGATCATCCTGGAGGCGATGAAGTT
genomic: TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAGgtcagatctt ... attgtaacagGTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTT
EST: gi|32265178|gb|CD716767.1|CD716767
EST:     TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAG                         GTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTT
genomic: TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAGgtcagatctt ... attgtaacagGTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTT
EST: gi|30129473|gb|CB914812.1|CB914812
EST:     TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAG                         GTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTT
genomic: TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAGgtcagatctt ... attgtaacagGTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTT
EST: gi|110387093|gb|EC951736.1|EC951736
EST:     TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAG                         GTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTT
genomic: TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAGgtcagatctt ... attgtaacagGTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTT
EST: gi|110716510|gb|EE091556.1|EE091556
EST:     TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAG                         GTGTATGATGTAACTCCATTCATGGATGATCATCCTGGAGGCGATGAAGTT
genomic: TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAGgtcagatctt ... attgtaacagGTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTT
EST: gi|18458694|gb|BM436972.1|BM436972
EST:     TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAG                         GTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTT
genomic: TCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAGgtcagatctt ... attgtaacagGTGTATGATGTAACTCCGTTCATGGATGATCATCCTGGAGGTGATGAAGTT

Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
AACAGCAGAAGAAATGGCATCAGATCCGAAGATTCACTTGTTCGAAGAGGTCGCCAAGCATAATCAGACCAAAGATTGCTGGCTGGTTATTTCCGGAAAGgtcagatcttaatcgattcgtttttgttctttccgaatcggttttcttaatagtttggttgtcgggaaaaccgaggaaagtgatagaaaatgaaattatg

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