Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|110685114|gb|EE063165.1|EE063165EST: TAGGTTTAGAGGACACTCTTTGGCTGATCCTGATGAGCTCCGTGACCCTG CTGAGAANGCTCATTATGCTGCTAGAGATCCCATCACAGCCTTGAAGAAAT
genomic: TAGGTTTAGAGGACACTCTTTGGCTGATCCTGATGAGCTCCGTGACCCTGgtaagcagtt ... attttggcagCTGAGAAGGCTCATTATGCTGCTAGAGATCCCCTCACAGCCTTGAAGAAAT
EST:
gi|110369802|gb|EC933971.1|EC933971EST: TAGGTTTAGAGGACACTCTTTGGCTGATCCTGATGAGCTCCGTGACCCTG CTGAGAAGGCTCATTATGCTGCTAGAGATCCCCTCACAGCCTTGAAGAAAT
genomic: TAGGTTTAGAGGACACTCTTTGGCTGATCCTGATGAGCTCCGTGACCCTGgtaagcagtt ... attttggcagCTGAGAAGGCTCATTATGCTGCTAGAGATCCCCTCACAGCCTTGAAGAAAT
EST:
gi|34544520|gb|CF512752.1|CF512752EST: TAGGTTTAGAGGACACTCTTTGGCTGATCCTGATGAGCTCCGTGACCCTG CTGAGAAGGCTCATTATGCTGCTAGAGATCCCCTCACAGCCTTGAAGAAAT
genomic: TAGGTTTAGAGGACACTCTTTGGCTGATCCTGATGAGCTCCGTGACCCTGgtaagcagtt ... attttggcagCTGAGAAGGCTCATTATGCTGCTAGAGATCCCCTCACAGCCTTGAAGAAAT
EST:
gi|161706589|gb|FC057207.1|FC057207EST: TAGGTTTAGAGGACACTCTTTGGCTGATCCTGATGAGCTCCGTGACCCTG CTGAGAAGGCTCATTATGCTGCTAGAGATCCCCTCACAGCCTTGAAGAAAT
genomic: TAGGTTTAGAGGACACTCTTTGGCTGATCCTGATGAGCTCCGTGACCCTGgtaagcagtt ... attttggcagCTGAGAAGGCTCATTATGCTGCTAGAGATCCCCTCACAGCCTTGAAGAAAT
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
CAAAGGGCTAGGAGAGGAGAAGGACCAACTCTGGTGGAATGTGAGACATATAGGTTTAGAGGACACTCTTTGGCTGATCCTGATGAGCTCCGTGACCCTGgtaagcagttagaattaattgtcttgccttgtttcgaattatccagttgtgatcttagtttccattaattttgatgatttttctgcctattgatttgtga
- - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGAT