Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|110392001|gb|EC957104.1|EC957104EST: GTTATACAGCTTCATGGCATCCTAGGAAACAG GTGGGCTGCCATTGCCTCTCAACTGCCCGGAAGGACCGATAATGAGATCAA
genomic: GTTATACAGCTTCATGGCATCCTAGGAAACAGgtactctatc ... ctatgttcagGTGGGCTGCCATTGCCTCTCAACTGCCCGGAAGGACCGATAATGAGATCAA
EST:
gi|71876706|gb|DT025761.1|DT025761EST: ACTGATGAAGAGAAGCTTGTCATACAGCTTCATGGCATCCTAGGAAACAG GTGGGCTGCCATTGCTTCTCAACTGCCCGGAAGGACTGATAATGAGATCAA
genomic: ACTGATGAAGAGAAGCTTGTTATACAGCTTCATGGCATCCTAGGAAACAGgtactctatc ... ctatgttcagGTGGGCTGCCATTGCCTCTCAACTGCCCGGAAGGACCGATAATGAGATCAA
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
TCCGATGGACCAATTATCTTAGACCAGACATTAAGCGAGGACCCTTCACTACTGATGAAGAGAAGCTTGTTATACAGCTTCATGGCATCCTAGGAAACAGgtactctatcaataatctggtttagcattaagcattgtgatcaatactccaaacccgataatctggtttagtattaagcattgtgatcaatagtccaaac
- - - - - - - - - - - - - - - - - - - - - - - - - - - TGAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAAGC