Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   		5  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TGGGCTACCGCATCACACCACTTTTCTCATACTATTCTTACCATGGACCTGTGTTTAGAGTCATGCTCCGAATGAACCGTGGAAAACTTCCTGAAAACAGgtgatagttgattgtgattccattttaaggtttttttatttttattttttattgtagctctgttatgtaggtgaccatgttttgtgttataactgtggcag

Basic information

species Vitis vinifera
transcript Vv13s0067g02690.t01
intron # 2
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: Vv13s0067g02690.t01 (Vitis vinifera), 5'ss of exon 2
lower sequence: AT3G56330.1 (Arabidopsis thaliana), 5'ss of exon 2
TGGGCTACCGCATCACACCACTTTTCTCATACTATTCTTACCATGGACCTGTGTTTAGAGTCATGCTCCGAATGAACCGTGGAAAACTTCCTGAAAACAGgtgatagttg-attgtgattccattttaaggtttttttatttttattttttattgtagctctgttatgtaggtgaccatgttttgtgttataactgtggcag
| || || |   | || || |||||||| ||||||||||| || |||||||||||||||||||||||  |  |  ||||||| || || | |||  ||||||  |   |  |||  || |     |  |      || | ||||  || |  |||    |||  | || || ||    | || ||| || ||||||| |   
TTGGTTATCATGTTACGCCTCTTTTCTCGTACTATTCTTATCACGGACCTGTGTTTAGAGTCATGCTGAGGGTTCACCGTGGGAAGCTACATGAGGACAGgttgtttctacatttagaatttgactcgaaaggaattgagttttggttat-gttgcgtttctaat-tggagttg----ttttgtgtcttttaactgtag---