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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TAAAGGGCCCATATATGCAGAAGCTAAAAAGCAAGCCTGGGATTTGGGCAGATTTTTAAGTACATTGTACTTTTTCAATGGGCCTCCATCTCCTGCTAAGgttctgtggtttctcttttaattttgcttatgtttagccataaataatatccatatttaaactgacaagatttcttttatttgtgaag

Basic information

species Vitis vinifera
transcript Vv10s0003g01640.t01
intron # 2
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: Vv10s0003g01640.t01 (Vitis vinifera), 5'ss of exon 2
lower sequence: AT4G18810.1 (Arabidopsis thaliana), 5'ss of exon 2
TAAAGGGCCCATATATGCAGAAGCTAAAAAGCAAGCCTGGGATTTGGGCAGATTTTTAAGTACATTGTACTTTTTCAATGGGCCTCCATCTCCTGCTAAGgttctgtggtttctcttttaattttgcttatgtttagccataaataatatccatatttaaactgacaagatttcttttatttgtgaag
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CAGAAAACGGGTCACTGCGAAATCAGGTTCTCAAGGTTGGGACTTTGGTAGATTCGTCAAAACATTGTACTTTTTCAATGGACCACCATCTCCT-CTAAAGgtatatatgaggacttttg-tttgattctcattgagaggtg--taatatagtcatttgaagtaattgattgtttcttgcttgtgaag