1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
GCACTGGGGACCATACATTTGAGCGAAGATTGCGTCTTGGTGGTCCATTGTTGAAGGAAAACATAGCAACCATGGTGCTTGAAAGgtgagaaccaattcaacagagttcattttttaaactggaagaaaagcttctcctaattgattaatgtgaaacaataattagtacttctaaatttagataaaaatatgtgactgcag
species | Vitis vinifera |
transcript | Vv08s0007g07700.t01 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: CTTGGTGGTCCATTGTTGAAGGAAAACATAGCAACCATGGTGCTTGAAAG CCCTTTTTATGGTCAGAGACGACCTGTGCTGCAGCGTGGTGCTAAGCTCTTEST: gi|110733119|gb|EE109032.1|EE109032
genomic: CTTGGTGGTCCATTGTTGAAGGAAAACATAGCAACCATGGTGCTTGAAAGgtgagaacca ... gtgactgcagCCCTTTTTATGGTCAGAGACGACCTGTGCTGCAGCGTGGTGCTAAGCTCTT
EST: CTTGGTGGTCCATTGTTGAAGGAAAACATAGCAACCATGGTGCTTGAAAG CCCTTTTTATGGTCAGAGACGACCTGTGCTGCAGCGTGGTGCTAAGCTCTT
genomic: CTTGGTGGTCCATTGTTGAAGGAAAACATAGCAACCATGGTGCTTGAAAGgtgagaacca ... gtgactgcagCCCTTTTTATGGTCAGAGACGACCTGTGCTGCAGCGTGGTGCTAAGCTCTT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GCACTGGGGACCATACATTTGAGCGAAGATTGCGTCTTGGTGGTCCATTGTTGAAGGAAAACATAGCAACCATGGTGCTTGAAAGgtgagaaccaattcaacagagttcattttttaaactggaagaaaagcttctcctaattgattaatgtgaaacaataattagtacttctaaatttagataaaaatatgtgactgcag
- - - - - - - - - - - - - - - - - - TGGTGG
- - - - - - - - - - - - - - - - - - - - - - - - - TTGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - AAGGAA