Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|30129208|gb|CB914547.1|CB914547EST: CTGGAAGGCAAATTCTCATATTACAACCTCCCCAAAGCCGCAAAG GATGAATGGGTCGTCTGTAGGGTATTCCACAAGAGCGCGGGGATCAAACGA
genomic: CTGGAAGGCAAATTCTCATATTACAACCTCCCCAAAGCCGCAAAGgtacatatat ... tttgttgcagGATGAATGGGTCGTCTGTAGGGTATTCCACAAGAGCGCGGGGATCAAACGA
EST:
gi|30136648|gb|CB921986.1|CB921986EST: CTGGAAGGCAAATTCTCATATTACAACCTCCCCAAAGCCGCAAAG GATGAATGGGTCGTCTGTAGGGTATTCCACAAGAGCGCGGGGATCAAACGA
genomic: CTGGAAGGCAAATTCTCATATTACAACCTCCCCAAAGCCGCAAAGgtacatatat ... tttgttgcagGATGAATGGGTCGTCTGTAGGGTATTCCACAAGAGCGCGGGGATCAAACGA
EST:
gi|161708609|gb|FC060442.1|FC060442EST: ACAGACTGGAAGGCAAATTCTCATATTACAACCTCCCCAAAGCCGCAAAG GATGAATGGGTCGTCTGTAGGGTATTCCACAAGAGCGCGGGGATCAAACGA
genomic: ACAGACTGGAAGGCAAATTCTCATATTACAACCTCCCCAAAGCCGCAAAGgtacatatat ... tttgttgcagGATGAATGGGTCGTCTGTAGGGTATTCCACAAGAGCGCGGGGATCAAACGA
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
CCGAGGGAGAGCCCCCAAAGGAGAGAAAAGCAATTGGGTCATGCACGAATACAGACTGGAAGGCAAATTCTCATATTACAACCTCCCCAAAGCCGCAAAGgtacatatatatatgccctataatatccctttttctcttttgagtttttgttccaacccaaccccatgtctctgtgccttttcaatgatcatcatcatca
- - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCAAAG