1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
TATAATTGGTCGCAAGGGTGAACATATCAAAAAACTTAGTGAGGAGACAAAGGCTCGCATAAAGATTCTCGATGGTCCTCCTGGAACATCTGAAAGAGCTgtgagtttctacctcaacttttataggtgttatatgtatttcttacaggaatggataacctaatattccgtgccttgttgatggtgttatggttgttagt...
species | Vitis vinifera |
transcript | Vv07s0141g00800.t01 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: AGGCTCGCATAAAGATTCTCGATGGCCCTCCTGGAACATCTGAAAGAGCT GTAATGGTTTCTGCGAAGGAAGAGCCTGATGCCCCAATTGCTCCTGCTATTEST: gi|110400230|gb|EC966783.1|EC966783
genomic: AGGCTCGCATAAAGATTCTCGATGGTCCTCCTGGAACATCTGAAAGAGCTgtgagtttct ... cttttgaaagGTAATGGTTTCTGCGAAGGAAGAGCCTGATGCCCCAATTGCTCCTGCTATT
EST: AGGCTCGCATAAAGATTCTCGATGGCCCTCCTGGAACATCTGAAAGAGCT GTAATGGTTTCTGCGAAGGAAGAGCCTGATGCCCCAATTGCTCCTGCTATT
genomic: AGGCTCGCATAAAGATTCTCGATGGTCCTCCTGGAACATCTGAAAGAGCTgtgagtttct ... cttttgaaagGTAATGGTTTCTGCGAAGGAAGAGCCTGATGCCCCAATTGCTCCTGCTATT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TATAATTGGTCGCAAGGGTGAACATATCAAAAAACTTAGTGAGGAGACAAAGGCTCGCATAAAGATTCTCGATGGTCCTCCTGGAACATCTGAAAGAGCTgtgagtttctacctcaacttttataggtgttatatgtatttcttacaggaatggataacctaatattccgtgccttgttgatggtgttatggttgttagt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -caggaat
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ggataac