Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|30125780|gb|CB911119.1|CB911119EST: AGATGGAGAAAGTACGGCCAAAAAGCTGTGAAAAACAGCCCCTTTCCTAG GAGTTACTATCGTTGCACCAGTGCATCATGTAATGTGAAGAAACGAGTGGA
genomic: AGATGGAGAAAGTACGGCCAAAAAGCTGTGAAAAACAGCCCCTTTCCTAGgtattgtact ... gtggatttagGAGTTACTATCGTTGCACCAGTGCATCATGTAATGTGAAGAAACGAGTGGA
EST:
gi|110730179|gb|EE106959.1|EE106959EST: AGATGGAGAAAGTACGGCCAAAAAGCTGTGAAAAACAGCCCCTTTCCTAG GAGTTACTATCGTTGCACCAGTGCATCATGTAATGTGAAGAAACGAGTGGA
genomic: AGATGGAGAAAGTACGGCCAAAAAGCTGTGAAAAACAGCCCCTTTCCTAGgtattgtact ... gtggatttagGAGTTACTATCGTTGCACCAGTGCATCATGTAATGTGAAGAAACGAGTGGA
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
GATTCGCCTTCATGACAAAGAGCGAGGTTGATCATCTGGAAGATGGGTACAGATGGAGAAAGTACGGCCAAAAAGCTGTGAAAAACAGCCCCTTTCCTAGgtattgtactcacacttgactcatctttttgtttggtatttttatggagcgtttggattgagagaaatgaaaagaaaatgctcaaaaatggtctcactttcttcaactatgttttcttctcatttctcttccttctctcttgctaattttctcatttttgtggatttag
- - - - - - - - - - - - - - - - - - - - - - - - - GATGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - TGGAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGCTG