1 5' 3' | 2 5' 3' |
CATTTGGAAATGAAATTTTGCTTGATAATGGTGAAGTTGACCGGGCAAAATTGGGTCAGATTGTATTTTCTGATCCGGGCAAACGCCAACTGCTCAACCGgtatattcatattcttagttcttttgaattttatgaaatgatgtttacttctgaatgcttggagataaaaatgataaatgtttacaattctatgcaatag...
species | Vitis vinifera |
transcript | Vv07s0005g00040.t01 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: TTGGGTCAGATTGTATTTTCTGATCCGGGCAAACGCCAACTGCTCAACCG GCTACTGGCCCCTTTTATATCATCTGGTATTTTTTGGGAAGTTTTCAAGCTEST: gi|110425944|gb|EC992340.1|EC992340
genomic: TTGGGTCAGATTGTATTTTCTGATCCGGGCAAACGCCAACTGCTCAACCGgtatattcat ... acatttttagGCTACTGGCCCCTTTTATATCATCTGGTATTTTTTGGGAAGTTTTCAAACT
EST: TTGGGTCAGATTGTATTTTCTGATCCGGGCAAACGCCAACTGCTCAACCG GCTACTGGCCCCTTTTATATCATCTGGTATTTTTTGGGAAGTTTTCAAACT
genomic: TTGGGTCAGATTGTATTTTCTGATCCGGGCAAACGCCAACTGCTCAACCGgtatattcat ... acatttttagGCTACTGGCCCCTTTTATATCATCTGGTATTTTTTGGGAAGTTTTCAAACT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CATTTGGAAATGAAATTTTGCTTGATAATGGTGAAGTTGACCGGGCAAAATTGGGTCAGATTGTATTTTCTGATCCGGGCAAACGCCAACTGCTCAACCGgtatattcatattcttagttcttttgaattttatgaaatgatgtttacttctgaatgcttggagataaaaatgataaatgtttacaattctatgcaatag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - gaaatga
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ataaaaa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -tgataaa