1 5' 3' | 2 5' 3' |
TGGTGGAGGCGATTCTGGTGGATCAGAGGATGAAGGCCTTTCTGGGATTATGGATGAAGCAGTGCAAGTGTTCTTAGCAACTGTTGCCTTTATATTGCTGgtaataatatctctcgttttctgtctcacaattagaaattctaaagcacattgttttccattaagagtcagaagcaagggaagattctcatgtaatggaa...
species | Vitis vinifera |
transcript | Vv05s0094g00390.t01 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: TGGATGAAGCAGTGCAAGTGTTCTTAGCAACTGTTGCCTTTATATTGCTG TATATATACCTCCTTGATGGTGAGGAGATGGTTCGGCTGGCAAGGGACTACEST: gi|110733173|gb|EE109135.1|EE109135
genomic: TGGATGAAGCAGTGCAAGTGTTCTTAGCAACTGTTGCCTTTATATTGCTGgtaataatat ... taaattgcagTATATATACCTCCTTGATGGTGAGGAGATGGTTCGGCTGGCAAGGGACTAC
EST: TGGATGAAGTAGTGCAAGTGTTCTTAGCAACTGTTGCCTTTATATTGCTG TATATATACCTCCTTGATGGTGAGGAGATGGTTCGGCTGGCAAGGGACTAC
genomic: TGGATGAAGCAGTGCAAGTGTTCTTAGCAACTGTTGCCTTTATATTGCTGgtaataatat ... taaattgcagTATATATACCTCCTTGATGGTGAGGAGATGGTTCGGCTGGCAAGGGACTAC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TGGTGGAGGCGATTCTGGTGGATCAGAGGATGAAGGCCTTTCTGGGATTATGGATGAAGCAGTGCAAGTGTTCTTAGCAACTGTTGCCTTTATATTGCTGgtaataatatctctcgttttctgtctcacaattagaaattctaaagcacattgttttccattaagagtcagaagcaagggaagattctcatgtaatggaa
- - - - - - - - - - - - - - - - - - - - - - - - - - - TGAAGC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -ttagaaa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - aaagcaca
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -aagggaa