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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TGGAAGGGGTGAACTTGTTATGGATCCAAAGGAGATTGCCAGGCGGTATTTGAAATCAGACTTCTTCATAGACCTGGTTGCAACATTGCCTCTTCCTCAGgtactttcttgaatttgctttcaatattggcccagtggggatgtgattagatctatgatattgcatgtttatggtagagattatagtttttctctttata...

Basic information

species Vitis vinifera
transcript Vv04s0069g00790.t01
intron # 2
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: Vv04s0069g00790.t01 (Vitis vinifera), 5'ss of exon 2
lower sequence: GLYMA06G08170.1 (Glycine max), 5'ss of exon 4
TGGAAGGGGTGAACTTGTTATGGATCCAAAGGAGATTGCCAGGCGGTATTTGAAATCAGACTTCTTCATAGACCTGGTTGCAACATTGCCTCTTCCTCAGgtactttcttgaatttgctttcaatattggcccagtggggatgtgattagatctatgatattgcatgt----ttatggtagagattatagtttttctctttata
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TGGCAGGGGAGAGCTTGTTATGGATCCTAGGCTGATTGCAAGGCGGTATTTGAGATCAGAGTTCTTCCTAGATCTTGTTGCTACATTGCCTCTTCCCCAGgtatcacaaatgcttcggccttaattct--ctcattttgtatatgtttaatgcaaaggaaatagaaacaatgttgcagtgcaagcgtaagtaacaagtccca--