Sequence
atgc intronic sequence ATGC exonic sequenceAGACCAAGTTAAAGGCCTAGAAGTTTTTGTGGATAACAAATGGCAATCTGTCAAACCTCGACCCGGTGCCCTGGTGGTTAACATTGGTGACACTTTCATGgtaggccttcatcttaattgccctccaacgtacagcttattgtctttaccaatgttccttggtaataatgcaacttatgatgttttacgattgatattgg...
Basic information
Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|110383966|gb|EC948375.1|EC948375EST: TCAAACCTCGACCCGGTGCCCTGGTGGTTAACATTGGTGACACTTTCATG GCACTATCCAATGGAAAATACAAGAGCTGTATACATAGGGCTGTGGTGAAC
genomic: TCAAACCTCGACCCGGTGCCCTGGTGGTTAACATTGGTGACACTTTCATGgtaggccttc ... tcatgtgtagGCACTATCCAATGGAAAATACAAGAGCTGTATACATAGGGCTGTGGTGAAC
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
AGACCAAGTTAAAGGCCTAGAAGTTTTTGTGGATAACAAATGGCAATCTGTCAAACCTCGACCCGGTGCCCTGGTGGTTAACATTGGTGACACTTTCATGgtaggccttcatcttaattgccctccaacgtacagcttattgtctttaccaatgttccttggtaataatgcaacttatgatgttttacgattgatattgg
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGTGG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ccctcca