1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
ATGTTGAAGAATTTTATCAGCAGTGCGATCCGGgttagggtttctgtttctgttattatcgatcttatgatatgggattttgtgttgttctgcttggttgctgagaaaatgtgggaattttggttgtttgcga...
species | Vitis vinifera |
transcript | Vv04s0008g01670.t01 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: ATGTTGAAGAATTTTATCAGCAGTGCGATCCGG ACAAGGAAAACCTATGCCTTTATGGATTTCCCAGTGAGCAGTGGGAAGTCAEST: gi|27578473|gb|CB001168.1|CB001168
genomic: ATGTTGAAGAATTTTATCAGCAGTGCGATCCGGgttagggttt ... ttaaccacagACAAGGAAAACCTATGCCTTTATGGATTTCCCAGTGAGCAGTGGGAAGTCA
EST: ATGTTGAAGAATTTTATCAGCAGTGCGATCCGG ACAAGGAAAACCTATGCCTTTATGGATTTCCCAGTGAGCAGTGGGAAGTCA
genomic: ATGTTGAAGAATTTTATCAGCAGTGCGATCCGGgttagggttt ... ttaaccacagACAAGGAAAACCTATGCCTTTATGGATTTCCCAGTGAGCAGTGGGAAGTCA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATGTTGAAGAATTTTATCAGCAGTGCGATCCGGgttagggtttctgtttctgttattatcgatcttatgatatgggattttgtgttgttctgcttggttgctgagaaaatgtgggaattttggttgtttgcga
- TTGAAG
- - TGAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -gagaaaa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -gtgggaa