Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|294965545|gb|GW839116.1|GW839116EST: GCACAGAGAGAGGAAACCCCACCTTCATCTCATGATCTTCTCCTCTATAG GAGAATAGCTGCGGTCAGAGAGAAGGAAAGGCAGAAGGTGTGGGAGGAGAT
genomic: GCACAGAGAGAGGAAACCCCACCTTCATCTCATGATCTTCTCCTCTATAGgtaagtatgt ... tacatttcagGAGAATAGCTGCGGTCAGAGAGAAGGAAAGGCAGAAGGTGTTGGAGGAGAT
EST:
gi|110373003|gb|EC937206.1|EC937206EST: GCACAGAGAGAGGAAACCCCACCTTCATCTCATGATCTTCTCCTCTATAG GAGAATAGCTGCGGTCAGAGAGAAGGAAAGGCAGAAGGTGTTGGAGGAGAT
genomic: GCACAGAGAGAGGAAACCCCACCTTCATCTCATGATCTTCTCCTCTATAGgtaagtatgt ... tacatttcagGAGAATAGCTGCGGTCAGAGAGAAGGAAAGGCAGAAGGTGTTGGAGGAGAT
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
TCCCTGCAGCTATTGATCAGCAGCTTGAGAATCTTCAGACGGATAGAGATGCACAGAGAGAGGAAACCCCACCTTCATCTCATGATCTTCTCCTCTATAGgtaagtatgttgatcactttacctacccttctggactcctagcagttgaatgtaacccataaatatacctgttttagattttgacatcacaatttgaatt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGAGG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CTCCTC