Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   		5  
 5'  3'   		6  
 5'  3'   		7  
 5'  3'   		8  
 5'  3'   		9  
 5'  3'   		10  
 5'  3'   		11  
 5'  3'   		12  
 5'  3'   		13  
 5'  3'   		14  
 5'  3'   		15  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CGCAGGTTCGATCGGAGGAAGCGAAGATGTTGGGGATTGTGAGTCGGAAGgtgagtagctgttttggtagagctgagaatgttgatggtttggtttgtggagtggattttttgtgaatgattggttagggagtgtggttgtggtgaattgatggctgtttgtatcag

Basic information

species Vitis vinifera
transcript Vv01s0146g00310.t01
intron # 2
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|351043256|gb|FQ443977.1|FQ443977
EST:     CGCGGGTTCGATCGGAGGAAGCGAAGATGTTGGGGATTGTGAGTCGGAAG                         GTTTTGGGGCAGTCGTTGGGAAGGATTAGGCCTGCGGTGTCGGCATTGAGG
genomic: CGCAGGTTCGATCGGAGGAAGCGAAGATGTTGGGGATTGTGAGTCGGAAGgtgagtagct ... tttgtatcagGTTTTGGGGCAGTCGTTGGGGAGGATTAGGCCTGCGGTGTGGGCATTGAGG
EST: gi|351034494|gb|FQ448170.1|FQ448170
EST:     CGCGGGTTCGATCGGAGGAAGCGAAGATGTTGGGGATTGTGAGTCGGAAG                         GTTTTGGGGCAGTCGTTGGGGAGGATTAGGCCTGCGGTGTCGGCATTGAGG
genomic: CGCAGGTTCGATCGGAGGAAGCGAAGATGTTGGGGATTGTGAGTCGGAAGgtgagtagct ... tttgtatcagGTTTTGGGGCAGTCGTTGGGGAGGATTAGGCCTGCGGTGTGGGCATTGAGG
EST: gi|351023552|gb|FQ432935.1|FQ432935
EST:     CGCGGGTTCGATCGGAGGAAGCGAAGATGTTGGGGATTGTGAGTCGGAAG                         GTTTTGGGGCAGTCGTTGGGGAGGATTAAGCCTGCGGTGTCGGCATTGAGG
genomic: CGCAGGTTCGATCGGAGGAAGCGAAGATGTTGGGGATTGTGAGTCGGAAGgtgagtagct ... tttgtatcagGTTTTGGGGCAGTCGTTGGGGAGGATTAGGCCTGCGGTGTGGGCATTGAGG
EST: gi|349817767|gb|FQ407756.1|FQ407756
EST:     CGCGGGTTCGATCGGAGGAAGCGAAGATGTTGGGGATTGTGAGTCGGAAG                         GTTTTGGGGCAGTCGTTGGGGAGGATTAGGCCTGCGGTGTCGGCATTGAGG
genomic: CGCAGGTTCGATCGGAGGAAGCGAAGATGTTGGGGATTGTGAGTCGGAAGgtgagtagct ... tttgtatcagGTTTTGGGGCAGTCGTTGGGGAGGATTAGGCCTGCGGTGTGGGCATTGAGG
EST: gi|351030938|gb|FQ438974.1|FQ438974
EST:     CGCGGGTTCGATCGGAGGAAGCGAAGATGTTGGGGATTGTGAGTCGGAAG                         GTTTTGGGGCAGTCGTTGGGGAGGATTAGGCCTGCGGTCTCGGCATTGAGG
genomic: CGCAGGTTCGATCGGAGGAAGCGAAGATGTTGGGGATTGTGAGTCGGAAGgtgagtagct ... tttgtatcagGTTTTGGGGCAGTCGTTGGGGAGGATTAGGCCTGCGGTGTGGGCATTGAGG
EST: gi|161721102|gb|FC070019.1|FC070019
EST:     --CAGGTTCGATCGGAGGAAGCGAAGATGTTGGGGATTGTGAGTCGGAAG                         GTTTTGGGGCAGTCGTTGGGGAGGATTAGGCCTGCGGTGTGGGCATTGAGG
genomic: CGCAGGTTCGATCGGAGGAAGCGAAGATGTTGGGGATTGTGAGTCGGAAGgtgagtagct ... tttgtatcagGTTTTGGGGCAGTCGTTGGGGAGGATTAGGCCTGCGGTGTGGGCATTGAGG
EST: gi|349814730|gb|FQ409953.1|FQ409953
EST:     CGCGGGTTCGATCGGAGGAAGCGAAGATGTTGGGGATTGTGAGTCGGAAG                         GTTTTGGGGCAGTCGTTGGGGAGGATTAGGCCTGCGGTGTCGGCATTGAGG
genomic: CGCAGGTTCGATCGGAGGAAGCGAAGATGTTGGGGATTGTGAGTCGGAAGgtgagtagct ... tttgtatcagGTTTTGGGGCAGTCGTTGGGGAGGATTAGGCCTGCGGTGTGGGCATTGAGG
EST: gi|351029889|gb|FQ427729.1|FQ427729
EST:     CGCGGGTTCGATCGGAGGAAGCGAAGATGTTGGGGATTGTGAGTCGGAAG                         GTTTTGGGGCAGTCGTTGGGGAGGATTAGGCCTGCGGTGTCGGCATTGAGG
genomic: CGCAGGTTCGATCGGAGGAAGCGAAGATGTTGGGGATTGTGAGTCGGAAGgtgagtagct ... tttgtatcagGTTTTGGGGCAGTCGTTGGGGAGGATTAGGCCTGCGGTGTGGGCATTGAGG
EST: gi|351027179|gb|FQ440047.1|FQ440047
EST:     CGCGGGTTCGATCGGAGGAAGCGAAGATGTTGGGGATTGTGAGTCGGAAG                         GTTTTGGGGCAGTCGTTGGGGAGGATTAGGCCTGCGGTGTCGGCATTGAGG
genomic: CGCAGGTTCGATCGGAGGAAGCGAAGATGTTGGGGATTGTGAGTCGGAAGgtgagtagct ... tttgtatcagGTTTTGGGGCAGTCGTTGGGGAGGATTAGGCCTGCGGTGTGGGCATTGAGG
EST: gi|349817147|gb|FQ405152.1|FQ405152
EST:     CGCGGGTTCGATCGGAGGAAGCGAAGATGTTGGGGATTGTGAGTCGGAAG                         GTTTTGGGGCAGTCGTTGGGGAGGATTAGGCCTGCGGTGTCGGCATTGAGG
genomic: CGCAGGTTCGATCGGAGGAAGCGAAGATGTTGGGGATTGTGAGTCGGAAGgtgagtagct ... tttgtatcagGTTTTGGGGCAGTCGTTGGGGAGGATTAGGCCTGCGGTGTGGGCATTGAGG
EST: gi|110365214|gb|EC927841.1|EC927841
EST:     --CAGGTTCGATCGGAGGAAGCGAAGATGTTGGGGATTGTGAGTCGGAAG                         GTTTTGGGGCAGTCGTTGGGGAGGATTAGGCCTGCGGTGTGGGCATTGAGG
genomic: CGCAGGTTCGATCGGAGGAAGCGAAGATGTTGGGGATTGTGAGTCGGAAGgtgagtagct ... tttgtatcagGTTTTGGGGCAGTCGTTGGGGAGGATTAGGCCTGCGGTGTGGGCATTGAGG
EST: gi|349828778|gb|FQ418513.1|FQ418513
EST:     CGCGGGTTCGATCGGAGGAAGCGAAGATGTTGGGGATTGTGAGTCGGAAG                         GTTTTGGGGCAGTCGTTGGGGAGGATTAGGCCTGCGGTGTCGGCATTGAGG
genomic: CGCAGGTTCGATCGGAGGAAGCGAAGATGTTGGGGATTGTGAGTCGGAAGgtgagtagct ... tttgtatcagGTTTTGGGGCAGTCGTTGGGGAGGATTAGGCCTGCGGTGTGGGCATTGAGG
EST: gi|351017574|gb|FQ435927.1|FQ435927
EST:     CGCGGGTTCGATCGGAGGAAGCGAAGATGTTGGGGATTGTGAGTCGGAAG                         GTTTTGGGGCAGTCGTTGGGGAGGATTAGGCCTGCGGTGTCGGCATTGAGG
genomic: CGCAGGTTCGATCGGAGGAAGCGAAGATGTTGGGGATTGTGAGTCGGAAGgtgagtagct ... tttgtatcagGTTTTGGGGCAGTCGTTGGGGAGGATTAGGCCTGCGGTGTGGGCATTGAGG
EST: gi|110685369|gb|EE062030.1|EE062030
EST:     CGCGGGTTCGATCGGAGGAAGCGAAGATGTTGGGGATTGTGAGTCGGAAG                         GTTTTGGGGCAGTCGTTGGGGAGGATTAGGCCTGCGGTGTCGGCATTGAGG
genomic: CGCAGGTTCGATCGGAGGAAGCGAAGATGTTGGGGATTGTGAGTCGGAAGgtgagtagct ... tttgtatcagGTTTTGGGGCAGTCGTTGGGGAGGATTAGGCCTGCGGTGTGGGCATTGAGG
EST: gi|71863160|gb|DT012215.1|DT012215
EST:     CGCGGGTTCGATCGGAGGAAGCGAAGATGTTGGGGATTGTGAGTCGGAAG                         GTTTTGGGGCAGTCGTTGGGAAGGATTAGGCCTGCGGTGTCGGCATTGAGG
genomic: CGCAGGTTCGATCGGAGGAAGCGAAGATGTTGGGGATTGTGAGTCGGAAGgtgagtagct ... tttgtatcagGTTTTGGGGCAGTCGTTGGGGAGGATTAGGCCTGCGGTGTGGGCATTGAGG
EST: gi|110365136|gb|EC928913.1|EC928913
EST:     --CAGGTTCGATCGGAGGAAGCGAAGATGTTGGGGATTGTGAGTCGGAAG                         GTTTTGGGGCAGTCGTTGGGGAGGATTAGGCCTGCGGTGTGGGCATTGAGG
genomic: CGCAGGTTCGATCGGAGGAAGCGAAGATGTTGGGGATTGTGAGTCGGAAGgtgagtagct ... tttgtatcagGTTTTGGGGCAGTCGTTGGGGAGGATTAGGCCTGCGGTGTGGGCATTGAGG
EST: gi|71863702|gb|DT012757.1|DT012757
EST:     CGCGGGTTCGATCGGAGGAAGCGAAGATGTTGGGGATTGTGAGTCGGAAG                         GTTTTGGGGCAGTCGTTGGGAAGGATTAGGCCTGCGGTGTCGGCATTGAGG
genomic: CGCAGGTTCGATCGGAGGAAGCGAAGATGTTGGGGATTGTGAGTCGGAAGgtgagtagct ... tttgtatcagGTTTTGGGGCAGTCGTTGGGGAGGATTAGGCCTGCGGTGTGGGCATTGAGG
EST: gi|110711640|gb|EE088353.1|EE088353
EST:     CGCGGGTTCGATCGGAGGAAGCGAAGATGTTGGGGATTGTGAGTCGGAAG                         GTTTTGGGGCAGTCGTTGGGGAGGATTAGGCCTGCGGTGTCGGCATTGAGG
genomic: CGCAGGTTCGATCGGAGGAAGCGAAGATGTTGGGGATTGTGAGTCGGAAGgtgagtagct ... tttgtatcagGTTTTGGGGCAGTCGTTGGGGAGGATTAGGCCTGCGGTGTGGGCATTGAGG
EST: gi|349832945|gb|FQ423067.1|FQ423067
EST:     CGCGGGTTCGATCGGAGGAAGCGAAGATGTTGGGGATTGTGAGTCGGAAG                         GTTTTGGGGCAGTCGTTGGGGAGGATTAGGCCTGCGGTGTCGGCATTGAGG
genomic: CGCAGGTTCGATCGGAGGAAGCGAAGATGTTGGGGATTGTGAGTCGGAAGgtgagtagct ... tttgtatcagGTTTTGGGGCAGTCGTTGGGGAGGATTAGGCCTGCGGTGTGGGCATTGAGG
EST: gi|349818046|gb|FQ408821.1|FQ408821
EST:     CGCGGGTTCGATCGGAGGAAGCGAAGATGTTGGGGATTGTGAGTCGGAAG                         GTTTTGGGGCAGTCGTTGGGGAGGATTAGGCCTGCGGTGTCGGCATTGAGG
genomic: CGCAGGTTCGATCGGAGGAAGCGAAGATGTTGGGGATTGTGAGTCGGAAGgtgagtagct ... tttgtatcagGTTTTGGGGCAGTCGTTGGGGAGGATTAGGCCTGCGGTGTGGGCATTGAGG
EST: gi|349830010|gb|FQ420270.1|FQ420270
EST:     CGCGGGTTCGATCGGAGGAAGCGAAGATGTTGGGGATTGTGAGTCGGAAG                         GTTTTGGGGCAGTCGTTGGGGAGGATTAGGCCTGCGGTGTCGGCATTGAGG
genomic: CGCAGGTTCGATCGGAGGAAGCGAAGATGTTGGGGATTGTGAGTCGGAAGgtgagtagct ... tttgtatcagGTTTTGGGGCAGTCGTTGGGGAGGATTAGGCCTGCGGTGTGGGCATTGAGG
EST: gi|349830031|gb|FQ420291.1|FQ420291
EST:     CGCGGGTTCGATCGGAGGAAGCGAAGATGTTGGGGATTGTGAGTCGGAAG                         GTTTTGGGGCAGTCGTTGGGGAGGATTAGGCCTGCGGTCTCGGCATTGAGG
genomic: CGCAGGTTCGATCGGAGGAAGCGAAGATGTTGGGGATTGTGAGTCGGAAGgtgagtagct ... tttgtatcagGTTTTGGGGCAGTCGTTGGGGAGGATTAGGCCTGCGGTGTGGGCATTGAGG
EST: gi|351015619|gb|FQ427104.1|FQ427104
EST:     CGCGGGTTCGATCGGAGGAAGCGAAGATGTTGGGGATTGTGAGTCGGAAG                         GTTTTGGGGCAGTCGTTGGGGAGGATTAGGCCTGCGGTGTCGGCATTGAGG
genomic: CGCAGGTTCGATCGGAGGAAGCGAAGATGTTGGGGATTGTGAGTCGGAAGgtgagtagct ... tttgtatcagGTTTTGGGGCAGTCGTTGGGGAGGATTAGGCCTGCGGTGTGGGCATTGAGG
EST: gi|351028389|gb|FQ427285.1|FQ427285
EST:     CGCGGGTTCGATCGGAGGAAGCGAAGATGTTGGGGATTGTGAGTCGGAAG                         GTTTTGGGGCAGTCGTTGGGAAGGATTAGGCCTGCGGTGTCGGCATTGAGG
genomic: CGCAGGTTCGATCGGAGGAAGCGAAGATGTTGGGGATTGTGAGTCGGAAGgtgagtagct ... tttgtatcagGTTTTGGGGCAGTCGTTGGGGAGGATTAGGCCTGCGGTGTGGGCATTGAGG
EST: gi|110719438|gb|EE094576.1|EE094576
EST:     CGCGGGTTCGATCGGAGGAAGCGAAGATGTTGGGGATTGTGAGTCGGAAG                         GTTTTGGGGCAGTCGTTGGGGAGGATTAGGCCTGCGGTGTCGGCATTGAGG
genomic: CGCAGGTTCGATCGGAGGAAGCGAAGATGTTGGGGATTGTGAGTCGGAAGgtgagtagct ... tttgtatcagGTTTTGGGGCAGTCGTTGGGGAGGATTAGGCCTGCGGTGTGGGCATTGAGG
EST: gi|349826357|gb|FQ417854.1|FQ417854
EST:     CGCGGGTTCGATCGGAGGAAGCGAAGATGTTGGGGATTGTGAGTCGGAAG                         GTTTTGGGGCAGTCGTTGGGGAGGATTAGGCCTGCGGTGTCGGCATTGAGG
genomic: CGCAGGTTCGATCGGAGGAAGCGAAGATGTTGGGGATTGTGAGTCGGAAGgtgagtagct ... tttgtatcagGTTTTGGGGCAGTCGTTGGGGAGGATTAGGCCTGCGGTGTGGGCATTGAGG
EST: gi|349815315|gb|FQ400470.1|FQ400470
EST:     CGCGGGTTCGATCGGAGGAAGCGAAGATGTTGGGGATTGTGAGTCGGAAG                         GTTTTGGGGCGGTCGTTGGGGAGGATTAGGCCTGCGGTGTCGGCATTGAGG
genomic: CGCAGGTTCGATCGGAGGAAGCGAAGATGTTGGGGATTGTGAGTCGGAAGgtgagtagct ... tttgtatcagGTTTTGGGGCAGTCGTTGGGGAGGATTAGGCCTGCGGTGTGGGCATTGAGG
EST: gi|110711678|gb|EE088431.1|EE088431
EST:     CGCGGGTTCGATCGGAGGAAGCGAAGATGTTGGGGATTGTGAGTCGGAAG                         GTTTTGGGGCAGTCGTTGGGGAGGATTAGGCCTGCGGTGTCGGCATTGAGG
genomic: CGCAGGTTCGATCGGAGGAAGCGAAGATGTTGGGGATTGTGAGTCGGAAGgtgagtagct ... tttgtatcagGTTTTGGGGCAGTCGTTGGGGAGGATTAGGCCTGCGGTGTGGGCATTGAGG
EST: gi|161715045|gb|FC064252.1|FC064252
EST:     --CAGGTTCGATCGGAGGAAGCGAAGATGTTGGGGATTGTGAGTCGGAAG                         GTTTTGGGGCAGTCGTTGGGGAGGATTAGGCCTGCGGTGTGGGCATTGAGG
genomic: CGCAGGTTCGATCGGAGGAAGCGAAGATGTTGGGGATTGTGAGTCGGAAGgtgagtagct ... tttgtatcagGTTTTGGGGCAGTCGTTGGGGAGGATTAGGCCTGCGGTGTGGGCATTGAGG
EST: gi|351014795|gb|FQ437995.1|FQ437995
EST:     CGCGGGTTCGATCGGAGGAAGCGAAGATGTTGGGGATTGTGAGTCGGAAG                         GTTTTGGGGCAGTCGTTGGGGAGGATTAGGCCTGCGGTGTCGGCATTGAGG
genomic: CGCAGGTTCGATCGGAGGAAGCGAAGATGTTGGGGATTGTGAGTCGGAAGgtgagtagct ... tttgtatcagGTTTTGGGGCAGTCGTTGGGGAGGATTAGGCCTGCGGTGTGGGCATTGAGG
EST: gi|294966748|gb|GW837767.1|GW837767
EST:     CGCGGGTTCGATCGGAGGAAGCGAAGATGTTGGGGATTGTGAGTCGGAAG                         GTTTTGGGGCAGTCGTTGGGGAGGATTAGGCCTGCGGTGTCGGCATTGAGG
genomic: CGCAGGTTCGATCGGAGGAAGCGAAGATGTTGGGGATTGTGAGTCGGAAGgtgagtagct ... tttgtatcagGTTTTGGGGCAGTCGTTGGGGAGGATTAGGCCTGCGGTGTGGGCATTGAGG
EST: gi|71861175|gb|DT010230.1|DT010230
EST:     CGCGGGTTCGATCGGAGGAAGCGAAGATGTTGGGGATTGTGAGTCGGAAG                         GTTTTGGGGCAGTCGTTGGGAAGGATTAGGCCTGCGGTGTCGGCATTGAGG
genomic: CGCAGGTTCGATCGGAGGAAGCGAAGATGTTGGGGATTGTGAGTCGGAAGgtgagtagct ... tttgtatcagGTTTTGGGGCAGTCGTTGGGGAGGATTAGGCCTGCGGTGTGGGCATTGAGG
EST: gi|351027102|gb|FQ439963.1|FQ439963
EST:     CGCGGGTTCGATCGGAGGAAGCGAAGATGTTGGGGATTGTGAGTCGGAAG                         GTTTTGGGGCAGTCGTTGGGGAGGATTAGGCCTGCGGTGTCGGCATTGAGG
genomic: CGCAGGTTCGATCGGAGGAAGCGAAGATGTTGGGGATTGTGAGTCGGAAGgtgagtagct ... tttgtatcagGTTTTGGGGCAGTCGTTGGGGAGGATTAGGCCTGCGGTGTGGGCATTGAGG
EST: gi|351029935|gb|FQ427775.1|FQ427775
EST:     CGCGGGTTCGATCGGAGGAAGCGAAGATGTTGGGGATTGTGAGTCGGAAG                         GTTTTGGGGCAGTCGTTGGGGAGGATTAGGCCTGCGGTGTCGGCATTGAGG
genomic: CGCAGGTTCGATCGGAGGAAGCGAAGATGTTGGGGATTGTGAGTCGGAAGgtgagtagct ... tttgtatcagGTTTTGGGGCAGTCGTTGGGGAGGATTAGGCCTGCGGTGTGGGCATTGAGG
EST: gi|349812258|gb|FQ411853.1|FQ411853
EST:     CGCGGGTTCGATCGGAGGAAGCGAAGATGTTGGGGATTGTGAGTCGGAAG                         GTTTTGGGGCAGTCGTTGGGGAGGATTAGGCCTGCGGTGTCGGCATTGAGG
genomic: CGCAGGTTCGATCGGAGGAAGCGAAGATGTTGGGGATTGTGAGTCGGAAGgtgagtagct ... tttgtatcagGTTTTGGGGCAGTCGTTGGGGAGGATTAGGCCTGCGGTGTGGGCATTGAGG
EST: gi|110398758|gb|EC965232.1|EC965232
EST:     --CAGGTTCGATCGGAGGAAGCGAAGATGTTGGGGATTGTGAGTCGGAAG                         GTTTTGGGGCAGTCGTTGGGGAGGATTAGGCCTGCGGTGTGGGCATTGAGG
genomic: CGCAGGTTCGATCGGAGGAAGCGAAGATGTTGGGGATTGTGAGTCGGAAGgtgagtagct ... tttgtatcagGTTTTGGGGCAGTCGTTGGGGAGGATTAGGCCTGCGGTGTGGGCATTGAGG
EST: gi|110718337|gb|EE095058.1|EE095058
EST:     CGCGGGTTCGATCGGAGGAAGCGAAGATGTTGGGGATTGTGAGTCGGAAG                         GTTTTGGGGCAGTCGTTGGGGAGGATTAGGCCTGCGGTGTCGGCATTGAGG
genomic: CGCAGGTTCGATCGGAGGAAGCGAAGATGTTGGGGATTGTGAGTCGGAAGgtgagtagct ... tttgtatcagGTTTTGGGGCAGTCGTTGGGGAGGATTAGGCCTGCGGTGTGGGCATTGAGG
EST: gi|161716774|gb|FC067499.1|FC067499
EST:     --CAGGTTCGATCGGAGGAAGCGAAGATGTTGGGGATTGTGAGTCGGAAG                         GTTTTGGGGCAGTCGTTGGGGAGGATTAGGCCTGCGGTGTGGGCATTGAGG
genomic: CGCAGGTTCGATCGGAGGAAGCGAAGATGTTGGGGATTGTGAGTCGGAAGgtgagtagct ... tttgtatcagGTTTTGGGGCAGTCGTTGGGGAGGATTAGGCCTGCGGTGTGGGCATTGAGG
EST: gi|110702444|gb|EE081168.1|EE081168
EST:     CGCGGGTTCGATCGGAGGAAGCGAAGATGTTGGGGATTGTGAGTCGGAAG                         GTTTTGGGGCAGTCGTTGGGGAGGATTAGGCCTGCGGTGTCGGCATTGAGG
genomic: CGCAGGTTCGATCGGAGGAAGCGAAGATGTTGGGGATTGTGAGTCGGAAGgtgagtagct ... tttgtatcagGTTTTGGGGCAGTCGTTGGGGAGGATTAGGCCTGCGGTGTGGGCATTGAGG
EST: gi|161710596|gb|FC058147.1|FC058147
EST:     --CAGGTTCGATCGGAGGAAGCGAAGATGTTGGGGATTGTGAGTCGGAAG                         GTTTTGGGGCAGTCGTTGGGGAGGATTAGGCCTGCGGTGTGGGCATTGAGG
genomic: CGCAGGTTCGATCGGAGGAAGCGAAGATGTTGGGGATTGTGAGTCGGAAGgtgagtagct ... tttgtatcagGTTTTGGGGCAGTCGTTGGGGAGGATTAGGCCTGCGGTGTGGGCATTGAGG

Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
CGCAGGTTCGATCGGAGGAAGCGAAGATGTTGGGGATTGTGAGTCGGAAGgtgagtagctgttttggtagagctgagaatgttgatggtttggtttgtggagtggattttttgtgaatgattggttagggagtgtggttgtggtgaattgatggctgtttgtatcag

- - - - - -  GGAGGA
- - - - - - - - - -  CGAAGA
- - - - - - - - - - -  AAGATG