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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TTGGAACTCCTATGATTCCTTCAGCTGGATCATCTCTGAAGAAGAGTTCCTGAAAAGTGCAGAAATTGTTTCACAGCGGCTACGCCCTTTTGGATATGAGgtacaaccatctggtacatgttcttatatcaataggtgaagggacgacttctctttgaatttgaggcttaactaactttcctcatttcgttgtaattgcttgcag

Basic information

species Vitis vinifera
transcript Vv01s0137g00630.t01
intron # 2
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: Vv01s0137g00630.t01 (Vitis vinifera), 5'ss of exon 2
lower sequence: GLYMA11G37760.2 (Glycine max), 5'ss of exon 2
TTGGAACTCCTATGATTCCTTCAGCTGGATCATCTCTGAAGAAGAGTTCCTGAAAAGTGCAGAAATTGTTTCACAGCGGCTACGCCCTTTTGGATATGAGgtacaaccatctggtacatgttcttatatcaatagg--tgaagggacgacttctctt-tgaatttgaggcttaactaactttcctcatttcgttgtaattgcttgcag
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TTGGAACTCCTATGATTCCTTTTGCTGGACAATTTCTGAAGAAGAATTCTTACAGAGTGCTGAAATAGTTTCTCAACGTCTCCATGATCATGGATACGAGgtatagtttctgaggaaccatagcta-atggatgagtttgaagttagtagtactttcattagatatagacatgataaccttccttcaaacccttgtag----------