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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GAAGCTCAAACCGTGCCCATGGGACGGGAAAACGTGACTGCTCTGCTTGAATTTTTCCAGTCCAAGGGACTGAATGTACTTGATTTGGTTGTCCTCTCAGgtgagttggtcccatcactactaattccatgcacgcatggtatagtaatactaatatgacttagaagtaggatcgtataacaggggcacactcaatgaat...

Basic information

species Vitis vinifera
transcript Vv01s0010g00390.t01
intron # 2
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|122689561|gb|EC941042.1|EC941042
EST:     CCAAGGGACTGAATGTACTTGATTTGGTTGTCCTCTCAG                         GAGCGCACACCATCGGGAGGACCACATGTGGTGCAATGCAACACCGGCTCT
genomic: CCAAGGGACTGAATGTACTTGATTTGGTTGTCCTCTCAGgtgagttggt ... ttgtctgcagGAGCGCACACCATCGGGAGGACCACATGTGGTGCAATGCAACACCGGCTGT