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GTCAGATAGGGAACTTCTGGGACCTAACAATCAATACCTTCCTCAAATTGTTGCAGTATTTGCTGAGgttagtctctatttttggattgattaatcaccgatgattgttctttgagattaagatataaaccagagcatggtatgattctcatctctcaaacccaaaa...
species | Vitis vinifera |
transcript | Vv06s0004g00500.t01 |
intron # | 19 |
splice site | 5' |
intron type | U2 |
EST: TGGGACCTAACAATCAATACCTTCCTCAAATTGTTGCAGTATTTGCTGAG GTTCTATGTGCGGGTAAGGATCTTGCAACAGAGCAAACCATAAGCCGGATGEST: gi|110389965|gb|EC954844.1|EC954844
genomic: TGGGACCTAACAATCAATACCTTCCTCAAATTGTTGCAGTATTTGCTGAGgttagtctct ... attaatgtagGTTCTATGTGCGGGTAAGGATCTTGCAACAGAGCAAACCATAAGCCGGATG
EST: TGGGACCTAACAATCAATACCTTCCTCAAATTGTTGCAGTATTTGCTGAG GTTCTATGTGCGGGTAAGGATCTTGCAACAGAGCAAACCATAAGCCGGATGEST: gi|110690073|gb|EE066851.1|EE066851
genomic: TGGGACCTAACAATCAATACCTTCCTCAAATTGTTGCAGTATTTGCTGAGgttagtctct ... attaatgtagGTTCTATGTGCGGGTAAGGATCTTGCAACAGAGCAAACCATAAGCCGGATG
EST: TGGGACCTAACAATCAATACCTTCCTCAAATTGNTGCAGTATTTGCTGAG GTTCTATGTGCGGGTAAGGATCTTGCTACAGAGCAAACCATAAGCCGGATG
genomic: TGGGACCTAACAATCAATACCTTCCTCAAATTGTTGCAGTATTTGCTGAGgttagtctct ... attaatgtagGTTCTATGTGCGGGTAAGGATCTTGCAACAGAGCAAACCATAAGCCGGATG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTCAGATAGGGAACTTCTGGGACCTAACAATCAATACCTTCCTCAAATTGTTGCAGTATTTGCTGAGgttagtctctatttttggattgattaatcaccgatgattgttctttgagattaagatataaaccagagcatggtatgattctcatctctcaaacccaaaa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -aaaccaga
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -aacccaaa