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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CAGTAATTGCCCCTGCATTCGTAAGGCTTGTGATTATCTGTTGTCCAAGGAGCTTGCTTCAGGTGGTTGGGGGGAGAGTTATCTGTCATGCCAGAACAAGgtttcgatttccgttctatgtggaatttttttcctttattgttctatatgcctcatgatgtttgttcttaataaatgctccttataaatctgcacagttg...

Basic information

species Vitis vinifera
transcript Vv09s0054g01550.t01
intron # 15
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: Vv09s0054g01550.t01 (Vitis vinifera), 5'ss of exon 15
lower sequence: GRMZM2G469298_T01 (Zea mays), 5'ss of exon 10
CAGTAATTGCCCCTGCATTCGTAAGGCTTGTGATTATCTGTTGTCCAAGGAGCTTGCTTCAGGTGGTTGGGGGGAGAGTTATCTGTCATGCCAGAACAAGgtttcgatttccgttctatgtggaatttttttcctttattgttctatatgcctcatgatgtttgttcttaataaatgctccttataaatctgcacagttg
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CAACAATAGTCCTGTAATAAAAAAGGCATGTGATTTTCTTTTGTCGAAGGAGCTTCCATCCGGTGGATGGGGAGAGAGTTATTTGTCATGTCAGAACAAGgtaacttgtcttatactctttccgttcttttttatttgtcgcgttttag---------------------------------------------------