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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GTTGTGTTTGTGGCTGTGATGAGATTCTTAGACAGTTGACAGAAATTTGCGGAACTGGCTCCCGCATTTgttctactgtaccaggtatctagtgtatgcttatccaatgcaattacttaaacattgttgcaagatgtggaaccagtttattatgaactactttctttcg...

Basic information

species Vitis vinifera
transcript Vv04s0044g01570.t01
intron # 14
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: Vv04s0044g01570.t01 (Vitis vinifera), 5'ss of exon 14
lower sequence: AT5G63920.1 (Arabidopsis thaliana), 5'ss of exon 21
GTTGTGTTTGTGGCTGTGATGAGATTCTTAGACAGTTGACAGAAATTTGCGGAACTGGCTCCCGC-------ATTTgttctactgtaccaggtatctagtgtatgcttatccaatgcaattacttaaacattgttgcaagatgtg--gaaccagtttattatg-aactactttctttcg---------------------------------------------------------
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GTTGCGTGGGTGGCTGTGATGACATTCTTAAACAGTTGATAGACATCTGTGGAACTGGATCCCGTTCTCAAGgttagtgctttgttgttacgcaatacatatacctttgtattagaca-tcatacaatctttctttcatcatcttctgtcctaaatgagaatgcaagaactttagtatagtgtcttgcgaatagagaacatttaggctaaaaagaatcaatgatttgttcttgcag