Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   		5  
 5'  3'   		6  
 5'  3'   		7  
 5'  3'   		8  
 5'  3'   		9  
 5'  3'   		10  
 5'  3'   		11  
 5'  3'   		12  
 5'  3'   		13  
 5'  3'   		14  
 5'  3'   		15  
 5'  3'   		16  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GTTTCTGCAGCTGGAATGGGGTTGAGTAGTTTCCTTATAGGATTATCATTCTTATTGCAGgtcttattacaaaattaactaccttttttcttttttaaatttatttgtctctactttaattttctcttctgtgtacatccag

Basic information

species Vitis vinifera
transcript Vv14s0030g00250.t01
intron # 13
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|110363498|gb|EC927091.1|EC927091
EST:     CTGGAATGGGGTTGAGTAGTTTCCTTATAGGATTATCATTCTTATTGCAG                         GACCTGAACCTGTGGAAAGAGATCACTCCTATTTTGGTGCTCATCGGCCTA
genomic: CTGGAATGGGGTTGAGTAGTTTCCTTATAGGATTATCATTCTTATTGCAGgtcttattac ... gtacatccagGACCTGAACCTGTGGAAAGAGATCACTCCTATTTTGGTGCTCATCGGCCTA
EST: gi|110698937|gb|EE077003.1|EE077003
EST:     CTGGAATGGGGTTGAGTAGTTTCCTTATAGGATTGTCATTCTTATTGCAG                         GACCTGAACCTGTGGAAAGAGATCACTCCTATTTTGGTGCTCATCGGCCTA
genomic: CTGGAATGGGGTTGAGTAGTTTCCTTATAGGATTATCATTCTTATTGCAGgtcttattac ... gtacatccagGACCTGAACCTGTGGAAAGAGATCACTCCTATTTTGGTGCTCATCGGCCTA