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GTTGACAGTTTATGGACGGTTGATGAATATGGAAAGAGTTGGCTCATTTCATCACTGACTTATGCTCTCCTTACAATCCACTACAACATTCCTTGTTCAGgtttatgattctcaatttttttttccttctgattttattctctttattatttattactgctcaatcaatttgttaaaaaaaatgttatattctatttgca...
species | Vitis vinifera |
transcript | Vv19s0027g01070.t01 |
intron # | 12 |
splice site | 5' |
intron type | U2 |
EST: ATCACTGACTTATGCTCTCCTTACAATCCACTACAACATTCCTTGTTCAG GTAATCAGCAGCATGGTTTGTCATGATTCGCCCCATTCCCGAAGGTACTCAEST: gi|32272501|gb|CD721660.1|CD721660
genomic: ATCACTGACTTATGCTCTCCTTACAATCCACTACAACATTCCTTGTTCAGgtttatgatt ... tttattgaagGTAATCAGCAGCATGGTTTGTCATGATTCGCCCCATTCCCGAAGGTACTCA
EST: ATCACTGACTTATGCTCTCCTTACAATCCACTACAACATTCCTTGTTCAG GTAATCAGCAGCATGGTTTGTCATGATTCGCCCCATTCCCGAAGGTACTCA
genomic: ATCACTGACTTATGCTCTCCTTACAATCCACTACAACATTCCTTGTTCAGgtttatgatt ... tttattgaagGTAATCAGCAGCATGGTTTGTCATGATTCGCCCCATTCCCGAAGGTACTCA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTTGACAGTTTATGGACGGTTGATGAATATGGAAAGAGTTGGCTCATTTCATCACTGACTTATGCTCTCCTTACAATCCACTACAACATTCCTTGTTCAGgtttatgattctcaatttttttttccttctgattttattctctttattatttattactgctcaatcaatttgttaaaaaaaatgttatattctatttgca
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - aaaaaaa