1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' |
TCAGCCGAGTTGGCTGAAGTCAAAGTCTGCCTCAAAGTCAACCACTGAATCTATCAAGGAATTTTCTGGATTTGATCGCGAGGCAGCAGAAAATTTACAGgttcgattctttgttgagattatttcattgttaatgagcatacccttaaattctctcgatgcaatcatagggaattgcctgatttcctgtatagttttgt...
species | Vitis vinifera |
transcript | Vv15s0046g02510.t01 |
intron # | 12 |
splice site | 5' |
intron type | U2 |
EST: CTATCAAGGAATTTTCTGGATTTGATCGCGAGGCAGCAGAAAATTTACAG AATGACTTGGATTGCATGCAATTGCCTGACACGATCCGCTGGCGTATCCAAEST: gi|110700399|gb|EE078395.1|EE078395
genomic: CTATCAAGGAATTTTCTGGATTTGATCGCGAGGCAGCAGAAAATTTACAGgttcgattct ... tatcgtgcagAATGACTTGGATTGCATGCAATTGCCTGACACGATCCGCTGGCGTATCCAA
EST: CTATCAAGGAATTTTCTGGATTTGATCGTGAAGCANTAAAAAATTTACAG AATGACTTGGATTGCATGCAATTGCCTGACACGATCCGCTGGCGTATCCAA
genomic: CTATCAAGGAATTTTCTGGATTTGATCGCGAGGCAGCAGAAAATTTACAGgttcgattct ... tatcgtgcagAATGACTTGGATTGCATGCAATTGCCTGACACGATCCGCTGGCGTATCCAA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TCAGCCGAGTTGGCTGAAGTCAAAGTCTGCCTCAAAGTCAACCACTGAATCTATCAAGGAATTTTCTGGATTTGATCGCGAGGCAGCAGAAAATTTACAGgttcgattctttgttgagattatttcattgttaatgagcatacccttaaattctctcgatgcaatcatagggaattgcctgatttcctgtatagttttgt
- - - - - - - - - - - - - - - - - - - - - - - - - - - AAGGAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - agggaat