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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GCTGCAGAGAGATGCATTGCCTCTTTTTAATATGCTAAGACAGTCTTACAAGTCAAGCATAGATAGAGAACCTGCATTTAATGAGgtttgccattttctctttttcttttttggttggtttaattttgcaccagagtttttcttctatttctcttttgttggatgaacctgaggtcttcagaatg...

Basic information

species Vitis vinifera
transcript Vv13s0019g03670.t01
intron # 12
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: Vv13s0019g03670.t01 (Vitis vinifera), 5'ss of exon 12
lower sequence: GLYMA20G31760.1 (Glycine max), 5'ss of exon 10
GCTGCAGAGAGATGCATTGCCTCTTTTTAATATGCTAAGACAGTCTTACAAGTCAAGCATAGATAGAGAACCTGCATTTAATGAGgtttgccatttt-ctctttttcttttttggttggtttaattttgcaccagagtttttcttctatttctcttttgtt-ggatgaacctgaggtcttcagaatg
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GTTGGAGAGAGATGCTTTGCCTCTTTTTAATATGTTGAGAACAAATTTTAAGCCAAGTATTGAGAGGGAGCCTGCGTTCAATGAGgtcagataacttacataccaagtcatatgctctgttttcctctctgttgttggtagataacaattagcaaatgatccacaaagatgttgggtgtccttat--