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CATGCAAATGGTGAAAATGCATGGATGGGCATAGATGGGAACACGGGTGCAATCACTGATATGAAAGAGCGCAAGgtaagagcttaatcatcttttgctttctctctttgtggattttttttaaatgaataatagttcaacagtaccatactgagaatttctagattattccaga...
species | Vitis vinifera |
transcript | Vv07s0130g00410.t01 |
intron # | 12 |
splice site | 5' |
intron type | U2 |
EST: TGGGCATAGATGGGAACACGGGTGCAATCACTGATATGAAAGAGCGCAAG ATTTGGGATGCTTACAATGTAAAGGCACAGACCTTTAAGACAGCCCTTGAAEST: gi|349823591|gb|FQ415001.1|FQ415001
genomic: TGGGCATAGATGGGAACACGGGTGCAATCACTGATATGAAAGAGCGCAAGgtaagagctt ... gtatggacagATTTGGGATGCTTACAATGTAAAGGCACAGACCTTTAAGACAGCCATTGAA
EST: TGGGCATAGATGGGAACACGGGTGCAATCACTGATATGAAAGAGCGCAAG ATTTGGGATGCTTACAATGTAAAGGCACAGACCTTTAAGACAGCCATCGAAEST: gi|351034297|gb|FQ448094.1|FQ448094
genomic: TGGGCATAGATGGGAACACGGGTGCAATCACTGATATGAAAGAGCGCAAGgtaagagctt ... gtatggacagATTTGGGATGCTTACAATGTAAAGGCACAGACCTTTAAGACAGCCATTGAA
EST: TGGGCATAGATGGGAACACGGGTGCAATCACTGATATGAAAGAGCGCAAG ATTTGGGATGCTTACAATGTAAAGGCACAGACCTTTAAGACAGCCATTGAA
genomic: TGGGCATAGATGGGAACACGGGTGCAATCACTGATATGAAAGAGCGCAAGgtaagagctt ... gtatggacagATTTGGGATGCTTACAATGTAAAGGCACAGACCTTTAAGACAGCCATTGAA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CATGCAAATGGTGAAAATGCATGGATGGGCATAGATGGGAACACGGGTGCAATCACTGATATGAAAGAGCGCAAGgtaagagcttaatcatcttttgctttctctctttgtggattttttttaaatgaataatagttcaacagtaccatactgagaatttctagattattccaga
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -tttctctc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -aaatgaa