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ATTAGCAGATCATACTGTTGAGGTGAACGTGCAACATGAGGTGCTTGATGGGATGTTCACTTTCTATGATTCTACAAAGGCCAGACTTAACATTTACCAGgtacaagttgtatattatttttctggctggggacagaaaaattatctatcaaaaaggaaaatgctaagtactttgctgttaacagactatacgcatcagc...
species | Vitis vinifera |
transcript | Vv06s0080g00880.t01 |
intron # | 12 |
splice site | 5' |
intron type | U2 |
EST: GGATGTTCACTTTCTATGATTCTACAAAGGCCAGACTTAACATTTACCAG GTTGCTAGTGTAACATTTGACTTACTGTTGCTCCTAGTGCTGGGATCATATEST: gi|254915992|gb|GR903850.1|GR903850
genomic: GGATGTTCACTTTCTATGATTCTACAAAGGCCAGACTTAACATTTACCAGgtacaagttg ... gttattgcagGTTGCTAGTGTAACATTTGACTTATTGTTGCTCCTAGTGCTGGGATCATAT
EST: GGATGTTCACTTTCTATGATTCTACAAAGGCCAGACTTAACATTTACCAG GTTGCTAGTGTAACATTTGACTTACTGTTGCTCCTAGTGCTGGGATCATATEST: gi|352773102|gb|FQ470717.1|FQ470717
genomic: GGATGTTCACTTTCTATGATTCTACAAAGGCCAGACTTAACATTTACCAGgtacaagttg ... gttattgcagGTTGCTAGTGTAACATTTGACTTATTGTTGCTCCTAGTGCTGGGATCATAT
EST: GGATGTTCACTTTCTATGATTCTACAAAGGCCAGACTTAACATTTACCAG GTTGCTAGTGTAACATTTGACTTATTGTTGCTCCTAGTGCTGGGATCATATEST: gi|33404283|gb|CF209910.1|CF209910
genomic: GGATGTTCACTTTCTATGATTCTACAAAGGCCAGACTTAACATTTACCAGgtacaagttg ... gttattgcagGTTGCTAGTGTAACATTTGACTTATTGTTGCTCCTAGTGCTGGGATCATAT
EST: GGATGTTCACTTTCTATGATTCTACAAAGGCCAGACTTAACATTTACCAG GTTACTAGTGTAACATTTGACTTACTGTTGCTCCTAGTGCTGGGATCATATEST: gi|32270593|gb|CD719752.1|CD719752
genomic: GGATGTTCACTTTCTATGATTCTACAAAGGCCAGACTTAACATTTACCAGgtacaagttg ... gttattgcagGTTGCTAGTGTAACATTTGACTTATTGTTGCTCCTAGTGCTGGGATCATAT
EST: GGATGTTCACTTTCTATGATTCTACAAAGGCCAGACTTAACATTTACCAG GTTGCTAGTGTAACATTTGACTTACTGTTGCTCCTAGTGCTGGGATCATATEST: gi|33404368|gb|CF209995.1|CF209995
genomic: GGATGTTCACTTTCTATGATTCTACAAAGGCCAGACTTAACATTTACCAGgtacaagttg ... gttattgcagGTTGCTAGTGTAACATTTGACTTATTGTTGCTCCTAGTGCTGGGATCATAT
EST: GGATGTTCACTTTCTATGATTCTACAAAGGCCAGACTTAACATTTACCAG GTTACTAGTGTAACATTTGACTTACTGTTGCTCCTAGTGCTGGGATCATAT
genomic: GGATGTTCACTTTCTATGATTCTACAAAGGCCAGACTTAACATTTACCAGgtacaagttg ... gttattgcagGTTGCTAGTGTAACATTTGACTTATTGTTGCTCCTAGTGCTGGGATCATAT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATTAGCAGATCATACTGTTGAGGTGAACGTGCAACATGAGGTGCTTGATGGGATGTTCACTTTCTATGATTCTACAAAGGCCAGACTTAACATTTACCAGgtacaagttgtatattatttttctggctggggacagaaaaattatctatcaaaaaggaaaatgctaagtactttgctgttaacagactatacgcatcagc
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- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -atcaaaa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - aggaaaa