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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CTTTGAGGTTCTTGGAGATAATGATTCTCCTGTAATGCCAATAATGCTTTACAATCCAGCCAAAATTCCTGCCTTTTCGCGGGAGTGTCTCAAACAGAATgtaagctttatctttaatttctatacattcaccattcatgtcttttcattcttgattaaagtagctgcaatacagagattccaagtcattcatttgtatagcactgctcattaatctccagttcaagttcacttgtgtggctagtattgacaagttatgctgttccag

Basic information

species Vitis vinifera
transcript Vv17s0000g00500.t01
intron # 11
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: Vv17s0000g00500.t01 (Vitis vinifera), 5'ss of exon 11
lower sequence: LOC_Os11g31640.1 (Oryza sativa), 5'ss of exon 10
CTTTGAGGTTCTTGGAGATAATGATTCTCCTGTAATGCCAATAATGCTTTACAATCCAGCCAAAATTCCTGCCTTTTCGCGGGAGTGTCTCAAACAGAATgtaagctttatctttaatttctatacattcaccattcatgtcttttcattcttgattaaagtagctgcaatacagagattccaagtcattcatttgtatagcactgctcattaatctccagttcaagttcacttgtgtggctagtattgacaagttatgctgttccag
 ||||||||||| ||||| ||||| ||||| || |||||||||||||| |||||||||||||||||||| || |||||  ||||||| || | ||| || || ||   |    |  | | ||||  ||    ||   |||       ||  | | ||     || |    |   |   ||||    |    |||    |   |||| |     |    || ||||                                           
TTTTGAGGTTCTCGGAGACAATGACTCTCCAGTTATGCCAATAATGCTCTACAATCCAGCCAAAATTCCAGCTTTTTCCAGGGAGTGCCTTAGACAAAAGgttagtaatggtatagaatgctatttatct-tcagaaatggtacagaataatggtttttgccagtt----ttttgtcgttccctagcccctattaccgtgcgactgatgtggcactggcatttcag------------------------------------------

upper sequence: Vv17s0000g00500.t01 (Vitis vinifera), 5'ss of exon 11
lower sequence: LOC_Os01g70360.1 (Oryza sativa), 5'ss of exon 10
CTTTGAGGTTCTTGGAGATAATGATTCTCCTGTAATGCCAATAATGCTTTACAATCCAGCCAAAATTCCTGCCTTTTCGCGGGAGTGTCTCAAACAGAATgtaagctttatctttaatttctatacattcaccattcatgtctt------ttcattcttgattaaagtagctgcaatacaga--gattccaagtcattcatttgtatagcactgctcattaatctccagttcaagttcacttgtgtggctagtattgacaagttatgctgttccag---------------------------
|||||||||||||||||||||||| || ||||| |||||  | ||| | |||||||| || ||||| ||||| || ||  | ||||| || || || ||||| || ||| |         | | | ||  |  |   |  |  |       || |    | |||    | ||  ||| || |    |  |||   | ||    || | | |||  |    | |  |    |  |  ||  || ||||  || ||   | ||||| ||| |||  |                            
CTTTGAGGTTCTTGGAGATAATGACTCACCTGTCATGCCTTTCATGGTCTACAATCCTGCTAAAATGCCTGCATTCTCAAGAGAGTGCCTGAAGCAAAATgtgagtttttttcaagtgcaccacaaatctattaaaaacctgataaaacaatcttgtccgtttagtaaatctctaatgcaaatttgtctcaaaatagtccaaagttttgtactatttg--agttacaccctgtaactcttttttgtg-ttattaaaaaaaagttttgcagttttaactaatgtggcatgttccatacttttag

upper sequence: Vv17s0000g00500.t01 (Vitis vinifera), 5'ss of exon 11
lower sequence: LOC_Os01g70370.1 (Oryza sativa), 5'ss of exon 10
CTTTGAGGTTCTTGGAGATAATGATTCTCCTGTAATGCCAATAATGCTTTACAATCCAGCCAAAATTCCTGCCTTTTCGCGGGAGTGTCTCAAACAGAATgtaagctttatctttaatttctatacattcaccattcatgtcttttcattcttgattaaagtagctgcaatacagagattccaagtcattcatttgtatagcactgctcattaatctccagttcaagttcacttgtgtggctagtattgacaagttatgctgttccag
 ||||| ||||||||||| || || || ||||| ||||| || |||||||||||||| || ||||| ||||| || ||  | ||||| || |  || || || || ||||| ||    ||| ||| | | |  ||||||    ||| | | |||| |   |||      | ||  ||| ||      ||| ||| | | |    |  || | | |  ||| |   |    || | | |   || |  |                    
TTTTGAAGTTCTTGGAGACAACGACTCGCCTGTCATGCCTATCATGCTTTACAATCCTGCTAAAATGCCTGCATTCTCAAGAGAGTGCCTGAGGCAAAAGgttagttttattttc---ttcaata-actaataattcat--tgttttagttttgaattcggtaat----acacccagaatctcttctattaatt-gcaaattttttttc-tgattgaccaatgtga--caacatattttcataattctag------------------

upper sequence: Vv17s0000g00500.t01 (Vitis vinifera), 5'ss of exon 11
lower sequence: LOC_Os01g70380.1 (Oryza sativa), 5'ss of exon 10
CTTTGAGGTTCTTGGAGATAATGATTCTCCTGTAATGCCAATAATGCTTTACAATCCAGCCAAAATTCCTGCCTTTTCGCGGGAGTGTCTCAAACAGAATgtaagcttt-atctttaatttctatacattcaccattcatgtcttttcattcttgattaaagtagctgcaatacagagattccaagtcattcatttgtatagcactgctcattaatctccagttcaagttcacttgtgtggctagtattgacaagttatgctgttccag
 ||||| ||||||||||| ||||| || || || ||||| || |||||||||||||| || ||||| ||||| || ||  | ||||| || |  ||  | || || ||| |   |  |  ||     |   |  | |||||  ||   | | |||| |  ||||||    | ||| |  |||       |||| |   | |   |||||  || |   | | |   |  |   |  |    ||||                        
TTTTGAAGTTCTTGGAGACAATGACTCGCCGGTCATGCCTATCATGCTTTACAATCCTGCTAAAATACCTGCGTTCTCAAGAGAGTGCCTGAGGCAACACgtgagttttcaaaatatacctcacctaacgaataaatcatgcttt---agttttgaatccagtagc----acacataatttc-------ttcactg--aaaattctgctgtttga---ctaatgtgacatgtttcataattctag------------------------

upper sequence: Vv17s0000g00500.t01 (Vitis vinifera), 5'ss of exon 11
lower sequence: GRMZM2G010202_T02 (Zea mays), 5'ss of exon 9
CTTTGAGGTTCTTGGAGATAATGATTCTCCTGTAATGCCAATAATGCTTTACAATCCAGCCAAAATTCCTGCCTTTTCGCGGGAGTGTCTCAAACAGAATgtaagctttatctttaat----ttctatacattcaccattcatgtcttttcattcttgattaaagtagctgcaatacagagattccaagtcattcatttgtatagcactgctcattaatctccagttcaagttcacttgtgtggctagtattgacaagttatgctgttccag
 |||||||||||||||||||||||||| ||||| ||||| || |||||||||||||| || ||||||||||| || ||  ||||||| || |  ||   ||| || | |      ||     |  |||      | ||| ||   |||     ||||    | |||   ||    | | |  ||||   |  ||  |  ||  |  | |      || ||  |||                                               
TTTTGAGGTTCTTGGAGATAATGATTCACCTGTCATGCCTATCATGCTTTACAATCCTGCTAAAATTCCTGCATTCTCAAGGGAGTGCCTGAGGCAAGCTgtgagttctcatacaaaccgtctgttatgtgcctagcatacagtgcttacatctcttagcgagagt--ttgtctcaaaaaagttcctcat--tttgtaagttcactaatatgatctattccacag-----------------------------------------------

upper sequence: Vv17s0000g00500.t01 (Vitis vinifera), 5'ss of exon 11
lower sequence: GRMZM2G030862_T01 (Zea mays), 5'ss of exon 9
CTTTGAGGTTCTTGGAGATAATGATTCTCCTGTAATGCCAATAATGCTTTACAATCCAGCCAAAATTCCTGCCTTTTCGCGGGAGTGTCTCAAACAGAATgtaagctttatctttaatttctatacattcaccattcatgtcttttcattcttgattaaagtagctgcaatacagagattccaagtcattcatttgtatagcactgctcattaatctccagttcaagttcacttgtgtggctagtattgacaagttatgctgttccag
||||||||||||||| || || || |||||||| ||||| |||||||| |||||||| ||||| |||||||| ||||| ||||||||  | | ||| || || |   |||    ||   | | |  |   | || ||      |   | |    ||| |   |  |    |        | ||                                                                                     
CTTTGAGGTTCTTGGTGACAACGACTCTCCTGTCATGCCCATAATGCTCTACAATCCGGCCAAGATTCCTGCGTTTTCTCGGGAGTGCTTTAGACAAAAGgtta---ttagtgctagagtttgtcgacgaaacactctgaagatccgaatagcaattgacagaattttt-tgtgctagctgcag------------------------------------------------------------------------------------

upper sequence: Vv17s0000g00500.t01 (Vitis vinifera), 5'ss of exon 11
lower sequence: GRMZM2G142030_T01 (Zea mays), 5'ss of exon 10
CTTTGAGGTTCTTGGAGATAATGATTCTCCTGTAATGCCAATAATGCTTTACAATCCAGCCAAAATTCCTGCCTTTTCGCGGGAGTGTCTCAAACAGAATgtaagctttatctttaat-------ttctatacattca-------ccattcatgtcttttcattcttgattaaagtagctgcaatacagagattccaagtcatt--catttgtatagcactgctcattaatctccagttcaagttcacttgtgtggctagtattgacaagttatgctgttccag-----------------
 |||||||||||||| || |||||||||||||| ||||| ||||||||||||||||| || || || ||||| || ||  ||||||| || | ||| || || ||   ||   ||  |       ||||  | || ||       | || | | |  |    || |   ||||| ||  | |  |  |||  |     |  | |  || ||| || | | | || ||  ||| | | ||      ||   || | | |  |  |     || |||| | |                     
TTTTGAGGTTCTTGGCGACAATGATTCTCCTGTTATGCCCATAATGCTTTACAATCCGGCTAAGATCCCTGCATTCTCTAGGGAGTGCCTTAGACAAAAGgtcagtcatagagtttgtcagactattctgaagatccagatagcactatgcttttggtacagttttcttttaaaata-ttactttg-agaagtctggtgctaatagcagttgcat-gtagtccttatccatcacta-tttgcacccatcggttttgttcttcctcttt-gtcatgcggctaataagacacttatatttcag

upper sequence: Vv17s0000g00500.t01 (Vitis vinifera), 5'ss of exon 11
lower sequence: GRMZM2G055854_T01 (Zea mays), 5'ss of exon 8
CTTTGAGGTTCTTGGAGATAATGATTCTCCTGTAATGCCAATAATGCTTTACAATCCAGCCAAAATTCCTGCCTTTTCGCGGGAGTGTCTCAAACAGAATgtaagctttatctttaatttctatacattcaccattcatgtcttttcattcttgattaaagtagctgcaatacagagattccaagtcattcatttgtatagcactgctcattaatctccagttcaagttcacttgtgtggctagtattgacaagttatgctgttccag
 |||||||||||||| || ||||| |||||||| ||||| |||||||| ||||||||||| || |||||||| || ||  ||||||| || | ||| || || ||   ||   ||  |    |||   | |  || ||  |      || |||  ||    ||  |  ||   | | || |   ||     | ||||   |  ||  |                                                            
TTTTGAGGTTCTTGGTGACAATGACTCTCCTGTCATGCCCATAATGCTCTACAATCCAGCTAAGATTCCTGCATTCTCTAGGGAGTGCCTTAGACAAAAGgttagtagtagagtttgtcagaatattctgaagatccaaatagcactatgctt--ttggtatacttttaa---aaaaatactttgtttgagaattgtg--gtgctaatag----------------------------------------------------------

upper sequence: Vv17s0000g00500.t01 (Vitis vinifera), 5'ss of exon 11
lower sequence: GRMZM2G137556_T01 (Zea mays), 5'ss of exon 6
CTTTGAGGTTCTTGGAGATAATGATTCTCCTGTAATGCCAATAATGCTTTACAATCCAGCCAAAATTCCTGCCTTTTCGCGGGAGTGTCTCAAACAGAATgtaagctttatctttaatttctatacattcaccattcatgtcttttcattcttgattaaagtagctgcaatacagagatt-ccaagtcattcatttgtatagcactgctcattaatctccagttcaagttcacttgtgtggctagtattgacaagttatgctgttccag
 |||||||||||||| || ||||| |||||||| ||||| |||||||| |||||||| || || |||||||| || ||  ||||||| || | ||| || || ||   ||   ||  |    |||   | |  || ||  |      ||  ||  ||    ||  |    |  | | | | |   ||     | |||||  |                                                                   
TTTTGAGGTTCTTGGTGACAATGACTCTCCTGTCATGCCCATAATGCTCTACAATCCGGCTAAGATTCCTGCATTCTCTAGGGAGTGCCTTAGACAAAAGgttagtagtagagtttgtcagaatattctgaagatccaaatagcactatggtt--ttggtatactttttttttaaaaaatactttgtttgagaattgtagtg-------------------------------------------------------------------

upper sequence: Vv17s0000g00500.t01 (Vitis vinifera), 5'ss of exon 11
lower sequence: GRMZM2G157249_T01 (Zea mays), 5'ss of exon 3
CTTTGAGGTTCTTGGAGATAATGATTCTCCTGTAATGCCAATAATGCTTTACAATCCAGCCAAAATTCCTGCCTTTTCGCGGGAGTGTCTCAAACAGAATgtaagc-------tttatctttaatttctatacattca-------ccattcatgtcttttcattcttgattaaagta------gctgcaatacagagattccaa--gtcattcatttgta--tagcactgctcattaat------ctccagttcaagttcacttgtgtggc-tagtattgacaagtta-tgctgttccag
 |||||||||||||| || ||||| |||||||| ||||| |||||||| |||||||| || || |||||||| || ||  ||||||| || | ||| || || ||        ||  ||   |  ||||  | || ||       | || | | |  | |  || ||  |||||  |      | |  |  |  | | | | ||  |  ||     ||||      |    ||| || |      | |  |||    |   | | | || | | ||| | | ||| || |  | || |||
TTTTGAGGTTCTTGGTGACAATGACTCTCCTGTCATGCCCATAATGCTCTACAATCCGGCTAAGATTCCTGCATTCTCTAGGGAGTGCCTTAGACAAAAGgttagtagtagagttcgtcagaatattctgaagatccaaatagcactatgcttttggtatacttttttcttaaaaaatactttgtttgagaattgtggtgctaatagcaatctgcatgtagtccatatccatcactatttgcacccactggtttcgttcttcctatctgtcatggtacttataagatacttatctttcag

upper sequence: Vv17s0000g00500.t01 (Vitis vinifera), 5'ss of exon 11
lower sequence: GRMZM2G067257_T01 (Zea mays), 5'ss of exon 11
CTTTGAGGTTCTTGGAGATAATGATTCTCCTGTAATGCCAATAATGCTTTACAATCCAGCCAAAATTCCTGCCTTTTCGCGGGAGTGTCTCAAACAGAATgtaagctttatctttaatttctatacattcaccattcatgtcttttcattcttgattaaagtagctgcaatacagagattccaagtcattcatttgtatagcactgctcattaatctccagttcaagttcacttgtgtggctagtattgacaagttatgctgttccag
 |||||||||||||| || ||||| |||||||| ||||| |||||||| |||||||| || || |||||||| || ||  ||||||| || | ||| || || ||   ||   ||  |    |||   | |  || ||  |      || |||  ||    ||  |    |  | | |    || |  ||  ||||   |     |                                                              
TTTTGAGGTTCTTGGTGACAATGACTCTCCTGTCATGCCCATAATGCTCTACAATCCGGCTAAGATTCCTGCATTCTCTAGGGAGTGCCTTAGACAAAAGgttagtagtagagtttgtcaggatattctgaagatccaaatagcactatgctt--ttggtatacttttttttaaaaaa----aaatactttgtttgagaattgtgg--------------------------------------------------------------

upper sequence: Vv17s0000g00500.t01 (Vitis vinifera), 5'ss of exon 11
lower sequence: GRMZM2G357734_T03 (Zea mays), 5'ss of exon 15
CTTTGAGGTTCTTGGAGATAATGATTCTCCTGTAATGCCAATAATGCTTTACAATCCAGCCAAAATTCCTGCCTTTTCGCGGGAGTGTCTCAAACAGAATgtaagc-------tttatctttaatttctatacattca------------ccattcatgt-cttttcattcttgattaaagtagctgcaatacagagattccaa--gtcattcatttgtatagcactgc--tcattaat------ctccagttcaagttcacttgtgtggc-tagtattgacaagtta-tgctgttccag
 |||||||||||||| || ||||| |||||||| ||||| |||||||| |||||||| || || |||||||| || ||  ||||||| || | ||| || || ||        ||| ||   |  ||||  | || ||            |  ||  | | |||||  || || |   |  | | |  |  |  | | | | ||  |  ||     ||||   || | |  ||| || |      | |  |||    |   | | | || | | ||| | | ||| || |  | || |||
TTTTGAGGTTCTTGGTGACAATGACTCTCCTGTCATGCCCATAATGCTCTACAATCCGGCTAAGATTCCTGCATTCTCTAGGGAGTGCCTTAGACAAAAGgttagtagtagagtttgtcaggatattctgaagatccaaatagcactatgcttttggtatactttttttttttaaaatactttgtttgagaattgtggtgctaatagcaatctgcatgtagtccatttccatcactatttgcacccactggttttgttcttcctatctgtcatggtacttataagatacttatctttcag

upper sequence: Vv17s0000g00500.t01 (Vitis vinifera), 5'ss of exon 11
lower sequence: GRMZM2G370377_T01 (Zea mays), 5'ss of exon 12
CTTTGAGGTTCTTGGAGATAATGATTCTCCTGTAATGCCAATAATGCTTTACAATCCAGCCAAAATTCCTGCCTTTTCGCGGGAGTGTCTCAAACAGAATgtaagctttatctttaatttctatacattcaccattcatgtcttttcattcttgattaaagtagctgcaatacagagattccaagtcattcatttgtatagcactgctcattaatctccagttcaagttcacttgtgtggctagtattgacaagttatgctgttccag
 |||||||||||||| || ||||| |||||||| ||||| |||||||| |||||||| || || |||||||| || ||  ||||||| || | ||| || || ||   ||   ||  |    |||   | |  || ||  |      || |||  ||    ||  |  || | | | | |     | |       | || |   |||| ||                                                         
TTTTGAGGTTCTTGGTGACAATGACTCTCCTGTCATGCCCATAATGCTCTACAATCCGGCTAAGATTCCTGCATTCTCTAGGGAGTGCCTTAGACAAAAGgttagtagtagagtttgtcagaatattctgaagatccaaatagcactatgctt--ttggtatacttttaaaaaaaatactttgtttga-------gaattgtggtgctaatag-------------------------------------------------------

upper sequence: Vv17s0000g00500.t01 (Vitis vinifera), 5'ss of exon 11
lower sequence: GRMZM2G152888_T01 (Zea mays), 5'ss of exon 10
CTTTGAGGTTCTTGGAGATAATGATTCTCCTGTAATGCCAATAATGCTTTACAATCCAGCCAAAATTCCTGCCTTTTCGCGGGAGTGTCTCAAACAGAATgtaagctttatctttaatttctatacattcaccattcatgtcttttcattcttgattaaagtagctgcaatacagagattccaagtcattcatttgtatagcactgctcattaatctccagttcaagttcacttgtgtggctagtattgacaagttatgctgttccag
 |||||||||||||| || ||||| |||||||| ||||| |||||||| |||||||| || || |||||||| || ||  ||||||| || | ||| || || ||   ||   ||  |    |||   | |  || ||  |      || |||  ||    ||  |    |  | | |     | |  ||  ||||   |     |                                                              
TTTTGAGGTTCTTGGTGACAATGACTCTCCTGTCATGCCCATAATGCTCTACAATCCGGCTAAGATTCCTGCATTCTCTAGGGAGTGCCTTAGACAAAAGgttagtagtagagtttgtcagaatattctgaagatccaaatagcactatgctt--ttggtatactttttttttaaaaa-----aatactttgtttgagaattgtggt-------------------------------------------------------------

upper sequence: Vv17s0000g00500.t01 (Vitis vinifera), 5'ss of exon 11
lower sequence: AT3G48780.1 (Arabidopsis thaliana), 5'ss of exon 10
CTTTGAGGTTCTTGGAGATAATGATTCTCCTGTAATGCCAATAATGCTTTACAATCCAGCCAAAATTCCTGCCTTTTCGCGGGAGTGTCTCAAACAGAATgtaagctttatctttaatttctatacattcaccattcatgtcttttcattcttgattaaagtagctgcaatacagagattccaagtcattcatttgtatagcactgctcattaatctccagttcaagttcacttgtgtggctagtattgacaagttatgctgttccag
 ||||| ||||||||||| |||||||| || || |||||||||||||||||||||||||| |||||||| || || ||  |||| ||| |   | | || || || ||    |    ||  || | | |     ||  ||  |   ||     || | |  |  ||    |  |  |||    | | |    | || | ||                                                                   
GTTTGAAGTTCTTGGAGACAATGATTCACCAGTCATGCCAATAATGCTTTACAATCCAGCAAAAATTCCAGCATTCTCAAGGGAATGTTTGCGAGAAAACgttagtttctcttgcttttcttaaaaaatatttttttttgcttccacacaagagactcacctc-ctatgttcaacggat----aatgaaatttgtgaacag-------------------------------------------------------------------

upper sequence: Vv17s0000g00500.t01 (Vitis vinifera), 5'ss of exon 11
lower sequence: AT5G23670.1 (Arabidopsis thaliana), 5'ss of exon 10
CTTTGAGGTTCTTGGAGATAATGATTCTCCTGTAATGCCAATAATGCTTTACAATCCAGCCAAAATTCCTGCCTTTTCGCGGGAGTGTCTCAAACAGAATgtaagctttatctttaatttctatacattcaccattcatgtcttttcattcttgattaaagtagctgcaatacagagattccaagtcattcatttgtatagcactgctcattaatctccagttcaagttcacttgtgtggctagtattgacaagttatgctgttccag
 |||||||| |||||||| |||||||| || || ||||| |||||||||||||| ||||| ||||| || || || ||  | || |||||   ||| || ||||| | |||  || |  || | | ||    |||  |||     ||  |    |  || ||| |   |  | | ||      | | | |  |  ||  |      |   | || |||                                                  
ATTTGAGGTACTTGGAGACAATGATTCCCCAGTCATGCCTATAATGCTTTACAACCCAGCAAAAATCCCAGCTTTCTCAAGAGAATGTCTGCGACAAAAAgtaagttctattattcaaatccaaatat----cat--atgagaactcgattaacac-aaggtaacaagatcaaaaagtaaatgattaacttgtgggtgcaatggaacct-tgaaactctgaacag-------------------------------------------

upper sequence: Vv17s0000g00500.t01 (Vitis vinifera), 5'ss of exon 11
lower sequence: AT3G48790.1 (Arabidopsis thaliana), 5'ss of exon 6
CTTTGAGGTTCTTGGAGATAATGATTCTCCTGTAATGCCAATAATGCTTTACAATCCAGCCAAAATTCCTGCCTTTTCGCGGGAGTGTCTCAAACAGAATgtaagctttatctttaatttctatacattcaccattcatgtcttttcattcttgattaaagtagctgcaatacagagattccaagtcattcatttgtatagcactgctcattaatctccagttcaagttcacttgtgtggctagtattgacaagttatgctgttccag
 ||  |||| ||||||| | ||||||| ||  | |||||||||||||||||||||||||| |||||  | ||||| ||  |||| ||| |   | | || |||||  |  | |||  |||| |   ||    || |    ||    ||     |||| |  |  ||    | ||  ||   ||  | |  | |||| | ||                                                                   
GTTCAAGGTCCTTGGAGTTTATGATTCCCCAATCATGCCAATAATGCTTTACAATCCAGCAAAAATCGCAGCCTTCTCAAGGGAATGTTTGCGAGAAAACgtaagtctcttatttgttttcca---atatctcacttgcttccgcgcaaaagagattcacct--ctatgtttcaatgaa--cattttaaac-tttgaacag-------------------------------------------------------------------

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|71872282|gb|DT021337.1|DT021337
EST:     ACAATCCAGCCAAAATTCCCGCCTTTTCGCGGGAGTGTCTCAAACAGAAT                         GTTGCTGTTGTGACAGTTGCTTTTCCAGCTACTCCACTTCTTTTGGCCAGG
genomic: ACAATCCAGCCAAAATTCCTGCCTTTTCGCGGGAGTGTCTCAAACAGAATgtaagcttta ... gctgttccagGTTGCTGTTGTGACAGTTGCTTTTCCAGCTACTCCACTTCTTTTGGCCAGG
EST: gi|71866164|gb|DT015219.1|DT015219
EST:     ACAATCCAGCCAAAATTCCCGCCTTTTCGCGGGAGTGTCTCAAACAGAAT                         GTTGCTGTTGTGACAGTTGCTTTTCCAGCTACTCCACTTCTTTTGGCCAGG
genomic: ACAATCCAGCCAAAATTCCTGCCTTTTCGCGGGAGTGTCTCAAACAGAATgtaagcttta ... gctgttccagGTTGCTGTTGTGACAGTTGCTTTTCCAGCTACTCCACTTCTTTTGGCCAGG
EST: gi|110360549|gb|EC923744.1|EC923744
EST:     ACAATCCAGCCAAAATTCCTGCCTTTTCGCGGGAGTGTCTCAAACAGAAT                         GTTGCTGTTGTGACAGTTGCTTTTCCAGCTACTCCACTTCTTTTGGCCAGG
genomic: ACAATCCAGCCAAAATTCCTGCCTTTTCGCGGGAGTGTCTCAAACAGAATgtaagcttta ... gctgttccagGTTGCTGTTGTGACAGTTGCTTTTCCAGCTACTCCACTTCTTTTGGCCAGG
EST: gi|34542727|gb|CF510959.1|CF510959
EST:     ACAATCCAGCCAAAATTCCCGCCTTTTCGCGGGAGTGTCTCAAACAGAAT                         GTTGCTGTTGTGACAGTTGCTTTTCCAGCTACTCCACTTCTTTTGGCCAGG
genomic: ACAATCCAGCCAAAATTCCTGCCTTTTCGCGGGAGTGTCTCAAACAGAATgtaagcttta ... gctgttccagGTTGCTGTTGTGACAGTTGCTTTTCCAGCTACTCCACTTCTTTTGGCCAGG
EST: gi|22015490|gb|BQ800524.1|BQ800524
EST:     AAAATTCCTGCCTTTTCGCGGGAGTGTCTCAAACAGAAT                         GTTGCTGTTGTGACAGTTGCTTTTCCAGCTACTCCACTTCTTTTGGCCAGG
genomic: AAAATTCCTGCCTTTTCGCGGGAGTGTCTCAAACAGAATgtaagcttta ... gctgttccagGTTGCTGTTGTGACAGTTGCTTTTCCAGCTACTCCACTTCTTTTGGCCAGG
EST: gi|110421496|gb|EC987793.1|EC987793
EST:     ACAATCCAGCCAAAATTCCTGCCTTTTCGCGGGAGTGTCTCAAACAGAAT                         GTTGCTGTTGTGACAGTTGCTTTTCCAGCTACTCCACTTCTTTTGGCCAGG
genomic: ACAATCCAGCCAAAATTCCTGCCTTTTCGCGGGAGTGTCTCAAACAGAATgtaagcttta ... gctgttccagGTTGCTGTTGTGACAGTTGCTTTTCCAGCTACTCCACTTCTTTTGGCCAGG
EST: gi|34416104|gb|CF414858.1|CF414858
EST:     GAGTGTCTCAAACAGAAT                         GTTGCTGTTGTGACAGTTGCTTTTCCAGCTACTCCACTTCTTTTGGGCAGG
genomic: GAGTGTCTCAAACAGAATgtaagcttta ... gctgttccagGTTGCTGTTGTGACAGTTGCTTTTCCAGCTACTCCACTTCTTTTGGCCAGG
EST: gi|45368189|gb|CK906548.1|CK906548
EST:     ACAATCCAGCCAAAATTCCTGCCTTTTCGCGGGAGTGTCTCAAACAGAAT                         GTTGCTGTTGTGACAGTTGCTTTTCCAGCTACTCCACTTCTTTTGGCCAGG
genomic: ACAATCCAGCCAAAATTCCTGCCTTTTCGCGGGAGTGTCTCAAACAGAATgtaagcttta ... gctgttccagGTTGCTGTTGTGACAGTTGCTTTTCCAGCTACTCCACTTCTTTTGGCCAGG
EST: gi|110385601|gb|EC950143.1|EC950143
EST:     ACAATCCAGCCAAAATTCCCGCCTTTTCGCGGGAGTGTCTCAAACAGAAT                         GTTGCTGTTGTGACAGTTGCTTTTCCAGCTACTCCACTTCTTTTGGCCAGG
genomic: ACAATCCAGCCAAAATTCCTGCCTTTTCGCGGGAGTGTCTCAAACAGAATgtaagcttta ... gctgttccagGTTGCTGTTGTGACAGTTGCTTTTCCAGCTACTCCACTTCTTTTGGCCAGG
EST: gi|30124998|gb|CB910337.1|CB910337
EST:     ACAATCCAGCCAAAATTCCTGCCTTTTCGCGGGAGTGTCTCAAACAGAAT                         GTTGCTGTTGTGACAGTTGCTTTTCCAGCTACTCCACTTCTTTTGGCCAGG
genomic: ACAATCCAGCCAAAATTCCTGCCTTTTCGCGGGAGTGTCTCAAACAGAATgtaagcttta ... gctgttccagGTTGCTGTTGTGACAGTTGCTTTTCCAGCTACTCCACTTCTTTTGGCCAGG
EST: gi|110366510|gb|EC930420.1|EC930420
EST:     ACAATCCAGCCAAAATTCCCGCCTTTTCGCGGGAGTGTCTCAAACAGAAT                         GTTGCTGTTGTGACAGTTGCTTTTCCAGCTACTCCACTTCTTTTGGCCAGG
genomic: ACAATCCAGCCAAAATTCCTGCCTTTTCGCGGGAGTGTCTCAAACAGAATgtaagcttta ... gctgttccagGTTGCTGTTGTGACAGTTGCTTTTCCAGCTACTCCACTTCTTTTGGCCAGG
EST: gi|34320121|gb|CF372875.1|CF372875
EST:     GGGAGTGTCTCAAACAGAAT                         GTGGCTGTTGTGACAGTTGCTTTTCCAGCTACTCCACTTCTTTTGGGCAGG
genomic: GGGAGTGTCTCAAACAGAATgtaagcttta ... gctgttccagGTTGCTGTTGTGACAGTTGCTTTTCCAGCTACTCCACTTCTTTTGGCCAGG
EST: gi|110697624|gb|EE074785.1|EE074785
EST:     ACAATCCAGCCAAAATTCCCGCCTTTTCGCGGGAGTGTCTCAAACAGAAT                         GTTGCTGTTGTGACAGTTGCTTTTCCAGCTACTCCACTTCTTTTGGCCAGG
genomic: ACAATCCAGCCAAAATTCCTGCCTTTTCGCGGGAGTGTCTCAAACAGAATgtaagcttta ... gctgttccagGTTGCTGTTGTGACAGTTGCTTTTCCAGCTACTCCACTTCTTTTGGCCAGG
EST: gi|30255672|gb|CB971804.1|CB971804
EST:     ACAATCCAGCCAAAATTCCCGCCTTTTCGCGGGAGTGTCTCAAACAGAAT                         GTTGCTGTTGTGACAGTTGCTTTTCCAGCTACTCCACTTCTTTTGGCCAGG
genomic: ACAATCCAGCCAAAATTCCTGCCTTTTCGCGGGAGTGTCTCAAACAGAATgtaagcttta ... gctgttccagGTTGCTGTTGTGACAGTTGCTTTTCCAGCTACTCCACTTCTTTTGGCCAGG