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GATCAAATCAAGTTGGATGAAGTCAAGTACCCTTTGGAACATTTTAAGgtagggtggtactttgaaacagattggtaatactttttcccccctgatgtactcacgaattttcatttctgtgcttgtttaatgattattgactatgtta...
species | Vitis vinifera |
transcript | Vv12s0055g00710.t01 |
intron # | 11 |
splice site | 5' |
intron type | U2 |
EST: GATCAAATCAAGTTGGATGAAGTCAAGTACCCTTTGGAACATTTTAAG ACATTCAATGAATTTTTTATAAGAGAGTTGAAACCTGGTGCTAGACCAATTEST: gi|32269098|gb|CD718257.1|CD718257
genomic: GATCAAATCAAGTTGGATGAAGTCAAGTACCCTTTGGAACATTTTAAGgtagggtggt ... ttatatgcagACATTCAATGAATTTTTTATAAGAGAGTTGAAACCTGGTGCTAGACCAATT
EST: GATCAAATCAAGTTGGATGAAGTCAAGTACCCTTTGGAACATTTTAAG ACATTCAATGAATTTTTTATAAGAGAGTTGAAACCTGGTGCTAGACCAATTEST: gi|32249664|gb|CD715483.1|CD715483
genomic: GATCAAATCAAGTTGGATGAAGTCAAGTACCCTTTGGAACATTTTAAGgtagggtggt ... ttatatgcagACATTCAATGAATTTTTTATAAGAGAGTTGAAACCTGGTGCTAGACCAATT
EST: GATCAAATCAAGTTGGATGAAGTCAAGTACCCTTTGGAACATTTTAAG ACATTCAATGAATTTTTTATAAGAGAGTTGAAACCTGGTGCTAGACCAATTEST: gi|30327654|gb|CD010916.1|CD010916
genomic: GATCAAATCAAGTTGGATGAAGTCAAGTACCCTTTGGAACATTTTAAGgtagggtggt ... ttatatgcagACATTCAATGAATTTTTTATAAGAGAGTTGAAACCTGGTGCTAGACCAATT
EST: GATCAAATCAAGTTGGATGAAGTCAAGTACCCTTTGGAACATTTTAAG ACATTCAATGAATTTTTTATAAGAGAGTTGAAACCTGGTGCTAGACCAATTEST: gi|110703791|gb|EE080956.1|EE080956
genomic: GATCAAATCAAGTTGGATGAAGTCAAGTACCCTTTGGAACATTTTAAGgtagggtggt ... ttatatgcagACATTCAATGAATTTTTTATAAGAGAGTTGAAACCTGGTGCTAGACCAATT
EST: GATCAAATCAAGTTGGATGAAGTCAAGTACCCTTTGGAACATTTTAAG ACATTCAATGAATTTTTTATAAGAGAGTTGAAACCTGGTGCTAGACCAATTEST: gi|32249812|gb|CD715631.1|CD715631
genomic: GATCAAATCAAGTTGGATGAAGTCAAGTACCCTTTGGAACATTTTAAGgtagggtggt ... ttatatgcagACATTCAATGAATTTTTTATAAGAGAGTTGAAACCTGGTGCTAGACCAATT
EST: GATCAAATCAAGTTGGATGAAGTCAAGTACCCTTTGGAACATTTTAAG ACATTCAATGAATTTTTTATAAGAGAGTTGAAACCTGGTGCTAGACCAATTEST: gi|32270392|gb|CD719551.1|CD719551
genomic: GATCAAATCAAGTTGGATGAAGTCAAGTACCCTTTGGAACATTTTAAGgtagggtggt ... ttatatgcagACATTCAATGAATTTTTTATAAGAGAGTTGAAACCTGGTGCTAGACCAATT
EST: GATCAAATCAAGTTGGATGAAGTCAAGTACCCTTTGGAACATTTTAAG ACATTCAATGAATTTTTTATAAGAGAGTTGAAACCTGGTGCTAGACCAATTEST: gi|71859767|gb|DT008822.1|DT008822
genomic: GATCAAATCAAGTTGGATGAAGTCAAGTACCCTTTGGAACATTTTAAGgtagggtggt ... ttatatgcagACATTCAATGAATTTTTTATAAGAGAGTTGAAACCTGGTGCTAGACCAATT
EST: GATCAAATCAAGTTGGATGAAGTCAAGTACCCTTTGGAACATTTTAAG ACATTCAATGAATTTTT-ATAAGAGAGTTGAAACCTGGTGCTAGACCAATTEST: gi|30325758|gb|CD009020.1|CD009020
genomic: GATCAAATCAAGTTGGATGAAGTCAAGTACCCTTTGGAACATTTTAAGgtagggtggt ... ttatatgcagACATTCAATGAATTTTTTATAAGAGAGTTGAAACCTGGTGCTAGACCAATT
EST: GATCAAATCAAGTTGGATGAAGTCAAGTACCCTTTGGAACATTTTAAG ACATTCAATGAATTTTTTATAAGAGAGTTGAAACCTGGTGCTAGACCAATT
genomic: GATCAAATCAAGTTGGATGAAGTCAAGTACCCTTTGGAACATTTTAAGgtagggtggt ... ttatatgcagACATTCAATGAATTTTTTATAAGAGAGTTGAAACCTGGTGCTAGACCAATT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GATCAAATCAAGTTGGATGAAGTCAAGTACCCTTTGGAACATTTTAAGgtagggtggtactttgaaacagattggtaatactttttcccccctgatgtactcacgaattttcatttctgtgcttgtttaatgattattgactatgtta
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -gaaacag
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