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GCCATTGCTGCCATGGCATGGGGGACAACATCATGCCCTAAGgtaatagttcccagttaatgtaccacacactttttggtattgcattgaagtaaaataagaattggattcttttgctggtaacctaagggttttgagttga...
species | Vitis vinifera |
transcript | Vv18s0166g00300.t01 |
intron # | 10 |
splice site | 5' |
intron type | U2 |
EST: GCCATTGCTGCCATGGCATGGGGGACAACATCATGCCCTAAG GTGGAAAAGATTTTTGGCCCTGGAAATCAGTATGTCACGGCTGCAAAAATGEST: gi|351054495|gb|FQ450579.1|FQ450579
genomic: GCCATTGCTGCCATGGCATGGGGGACAACATCATGCCCTAAGgtaatagttc ... taatttgcagGTGGAAAAGATTTTTGGCCCTGGAAATCAGTATGTCACGGCTGCAAAAATG
EST: GCCATTGCTGCCATGGCATGGGGGACAACATCATGCCCTAAG GTGGAAAAGATTTTTGGCCCTGGAAATCAGTATGTCACGGCTGCAAAAATG
genomic: GCCATTGCTGCCATGGCATGGGGGACAACATCATGCCCTAAGgtaatagttc ... taatttgcagGTGGAAAAGATTTTTGGCCCTGGAAATCAGTATGTCACGGCTGCAAAAATG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GCCATTGCTGCCATGGCATGGGGGACAACATCATGCCCTAAGgtaatagttcccagttaatgtaccacacactttttggtattgcattgaagtaaaataagaattggattcttttgctggtaacctaagggttttgagttga
- - TGCTGC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -aaaataa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - gaattgga