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TTTGAGCAGGACACTGTTTTGATACCTAAAGAAACCTCCTGGTTTGGATATTACCCAGACGGGGCCTTTGAACCAGTTCTGCCTCCACAACAGgtattgcatttgaaaaattagttttagatctgatgcttgttgaaatttgtggattggtgactagtgttacaacagctcttagaagcgaaaggaaaaaatg...
species | Vitis vinifera |
transcript | Vv02s0488g00020.t01 |
intron # | 10 |
splice site | 5' |
intron type | U2 |
EST: TTGGATATTACCCAGACGGGGCCTTTGAACCAGTTCTGCCTCCACAACAG ACAAAGCTTTACACTGAGGACTGGATTGGTTTGAAAACCTTGGATGATGCCEST: gi|33401770|gb|CF207397.1|CF207397
genomic: TTGGATATTACCCAGACGGGGCCTTTGAACCAGTTCTGCCTCCACAACAGgtattgcatt ... atctgggcagACAAAGCTTTACACTGAGGACTGGATTGGTTTGAAAACCTTGGATGATGCC
EST: TTGGATATTACCCAGACGGGGCCTTTGAACCAGTTCTGCCTCCACAACAG ACAAAGCTTTACACTGAGGACTGGATTGGTTTGAAAACCTTGGATGATGCCEST: gi|110387835|gb|EC952533.1|EC952533
genomic: TTGGATATTACCCAGACGGGGCCTTTGAACCAGTTCTGCCTCCACAACAGgtattgcatt ... atctgggcagACAAAGCTTTACACTGAGGACTGGATTGGTTTGAAAACCTTGGATGATGCC
EST: TTGGATATTACCCAGACGGGGCCTTTGAACCAGTTCTGCCTCCACAACAG ACAAAGCTTTACACTGAGGACTGGATTGGTTTGAAAACCTTGGATGATGCC
genomic: TTGGATATTACCCAGACGGGGCCTTTGAACCAGTTCTGCCTCCACAACAGgtattgcatt ... atctgggcagACAAAGCTTTACACTGAGGACTGGATTGGTTTGAAAACCTTGGATGATGCC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TTTGAGCAGGACACTGTTTTGATACCTAAAGAAACCTCCTGGTTTGGATATTACCCAGACGGGGCCTTTGAACCAGTTCTGCCTCCACAACAGgtattgcatttgaaaaattagttttagatctgatgcttgttgaaatttgtggattggtgactagtgttacaacagctcttagaagcgaaaggaaaaaatg
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