1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
CTGTTCGTTTGCGCCCATGGAATCGGCTAAGATTAAGGTTGTGGGTGTCGGTGGTGGGGGCAACAATGCCGTTAATCGGATGATTGGAAGCGGATTACAGgtggaatttgctttcaactgaaattttgaatcatatcctgtccatatttggtgattgggtctgttattccgtgcccgttataatgaaaaaaatttgtcga...
species | Vitis vinifera |
transcript | Vv19s0090g01320.t01 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: GTGGTGGGGGCAACAATGCCGTTAATCGGATGATTGGAAGCGGATTACAG GGTGTTGATTTCTATGCAATAAATACAGACTCTCAAGCTCTATTACACTCTEST: gi|71865724|gb|DT014779.1|DT014779
genomic: GTGGTGGGGGCAACAATGCCGTTAATCGGATGATTGGAAGCGGATTACAGgtggaatttg ... tgatattcagGGTGTTGATTTCTATGCAATAAATACAGACTCTCAAGCTCTATTACACTCT
EST: GTGGTGGGGGCAACAATGCCGTTAATCGGATGATTGGAAGCGGATTACAG GGTGTTGATTTCTATGCAATAAATACAGACTCTCAAGCTCTATTACACTCT
genomic: GTGGTGGGGGCAACAATGCCGTTAATCGGATGATTGGAAGCGGATTACAGgtggaatttg ... tgatattcagGGTGTTGATTTCTATGCAATAAATACAGACTCTCAAGCTCTATTACACTCT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CTGTTCGTTTGCGCCCATGGAATCGGCTAAGATTAAGGTTGTGGGTGTCGGTGGTGGGGGCAACAATGCCGTTAATCGGATGATTGGAAGCGGATTACAGgtggaatttgctttcaactgaaattttgaatcatatcctgtccatatttggtgattgggtctgttattccgtgcccgttataatgaaaaaaatttgtcga
- - - - - - - - - - - - - - - - - - - - - - - - - TGGTGG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -aactgaaa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -aaaaaaa