Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|110373096|gb|EC937306.1|EC937306EST: CAGGGTCCTTTCTTTGGCTTCATTGGCAAGAATGAGATTTCCAATGGAAG ATGGGCAATGTTCGGTTTTGCTGTTGGGATGCTAACAGAGTACGCAACAGG
genomic: CAGGGTCCTTTCTTTGGCTTCATTGGCAAGAATGAGATTTCCAATGGAAGgtacatgatg ... tgttaatcagATGGGCAATGTTCGGTTTTGCTGTTGGGATGCTAACAGAGTACGCAACAGG
EST:
gi|110418313|gb|EC984458.1|EC984458EST: CAGGGTCCTTTCTTTGGCTTCATTGGCAAGAATGAGATTTCCAATGGAAG ATGGGCAATGTTCGGTTTTGCTGTTGTGATGCTAACAGAGTACGCAACAGG
genomic: CAGGGTCCTTTCTTTGGCTTCATTGGCAAGAATGAGATTTCCAATGGAAGgtacatgatg ... tgttaatcagATGGGCAATGTTCGGTTTTGCTGTTGGGATGCTAACAGAGTACGCAACAGG
EST:
gi|46919203|gb|CN548532.1|CN548532EST: CAGGGTCCTTTCTTTGGCTTCATTGGCAAGAATGAGATTTCCAATGGAAG ATGGGCAATGTTCGGTTTTGCTGTTGGGATGCTAACAGAGTACGCAACAGG
genomic: CAGGGTCCTTTCTTTGGCTTCATTGGCAAGAATGAGATTTCCAATGGAAGgtacatgatg ... tgttaatcagATGGGCAATGTTCGGTTTTGCTGTTGGGATGCTAACAGAGTACGCAACAGG
EST:
gi|110366292|gb|EC930113.1|EC930113EST: CAGGGTCCTTTCTTTGGCTTCATTGGCAAGAATGAGATTTCCAATGGAAG ATGGGCAATGTTCGGTTTTGCTGTTGGGATGCTAACAGAGTACGCAACAGG
genomic: CAGGGTCCTTTCTTTGGCTTCATTGGCAAGAATGAGATTTCCAATGGAAGgtacatgatg ... tgttaatcagATGGGCAATGTTCGGTTTTGCTGTTGGGATGCTAACAGAGTACGCAACAGG
EST:
gi|110421337|gb|EC987633.1|EC987633EST: CAAGAATGAGATTTCCAATGGAAG ATGGGCAATGTTCGGTTTTGCTGTTGGGATGCTAACAGAGTACGCAACAGG
genomic: CAAGAATGAGATTTCCAATGGAAGgtacatgatg ... tgttaatcagATGGGCAATGTTCGGTTTTGCTGTTGGGATGCTAACAGAGTACGCAACAGG
EST:
gi|110428261|gb|EC994727.1|EC994727EST: CAGGGTCCTTTCTTTGGCTTCATTGGCAAGAATGAGATTTCCAATGGAAG ATGGGCAATGTTCGGTTTTGCTGTTGGGATGCTAACAGAGTACGCAACAGG
genomic: CAGGGTCCTTTCTTTGGCTTCATTGGCAAGAATGAGATTTCCAATGGAAGgtacatgatg ... tgttaatcagATGGGCAATGTTCGGTTTTGCTGTTGGGATGCTAACAGAGTACGCAACAGG
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
CTAAGGAGCTTCAGGATTATTTCAAGCAGAGGAAGCTTGAGGAGGCCAATCAGGGTCCTTTCTTTGGCTTCATTGGCAAGAATGAGATTTCCAATGGAAGgtacatgatgtttttctttctctattttgtcagattttgaattttttcagctttgggtttcaagaatttggccaatttgactgacccatatgagtataat
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAAG