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 5'  3'   		2  
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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CCTCGCTAGGGAATTCTTTGCTTTGCCTGCGGAAGAGAAGCTTCGGTTCGACATGTCTGGTGGCAAGAAGGGAGGATTCATCGTCTCCAGTCATCTCCAGgtactcttttgcttccgtttgattcaaaatcaagaaagcgatagacagagattgcaggaattttgagttattggaaggttgatacatattaatcttctta...

Basic information

species Vitis vinifera
transcript Vv18s0001g14310.t01
intron # 1
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: Vv18s0001g14310.t01 (Vitis vinifera), 5'ss of exon 1
lower sequence: LOC_Os04g56700.1 (Oryza sativa), 5'ss of exon 1
CCTCGCTAGGGAATTCTTTGCTTTGCCTGCGGAAGAGAAGCTTCGGTTCGACATGTCTGGTGGCAAGAAGGGAGGATTCATCGTCTCCAGTCATCTCCAGgtac-tcttttgcttccgtttgattcaaaatcaagaaagcgatagacagagattgcaggaattttgagttattggaaggttgatacatattaatcttctta
||||||  | || ||||| ||  ||||  |||| || ||||| |||||||||||||| || ||||||||||| ||||||||||||||||| || |||||||||| ||   |     |  || |        |           |  |  ||    |         |       |  | || |||    ||   |  |||  
CCTCGCCCGCGACTTCTTCGCGCTGCCGCCGGAGGACAAGCTCCGGTTCGACATGTCCGGCGGCAAGAAGGGCGGATTCATCGTCTCCAGCCACCTCCAGgtacgtcacgtcacgtcacttcacgtcgttacgttcctagagcactcgaagtcgacgcacgcgcgggaacggcgacatgtcgatcaccatgtctgctctg-

upper sequence: Vv18s0001g14310.t01 (Vitis vinifera), 5'ss of exon 1
lower sequence: GRMZM2G062396_T01 (Zea mays), 5'ss of exon 1
CCTCGCTAGGGAATTCTTTGCTTTGCCTGCGGAAGAGAAGCTTCGGTTCGACATGTCTGGTGGCAAGAAGGGAGGATTCATCGTCTCCAGTCATCTCCAGgtactcttttgcttccgtttgattcaaaatcaagaaagcgatagacagagattgcaggaattttgagttattggaaggttgatacatattaatcttctta---
||||||  | || ||||| ||  | ||  | || || ||||| || ||||||||||| || || |||||||| || |||||||||||||| || ||||||||     ||||  |    || | |||       |   |||      | |   ||  |  ||||     |    | | |   ||| ||  |     |||     
CCTCGCGCGCGACTTCTTCGCGCTCCCGCCCGAGGACAAGCTCCGCTTCGACATGTCCGGCGGGAAGAAGGGCGGCTTCATCGTCTCCAGCCACCTCCAGgt-----tttgtata---tttactcatgcc---gggtgcgcctactacatgctgatgtgatttactcatgcatgcatgcatatatatggtctcgctctcgcag

upper sequence: Vv18s0001g14310.t01 (Vitis vinifera), 5'ss of exon 1
lower sequence: GLYMA02G05470.1 (Glycine max), 5'ss of exon 1
CCTCGCTAGGGAATTCTTTGCTTTGCCTGCGGAAGAGAAGCTTCGGTTCGACATGTCTGGTGGCAAGAAGGGAGGATTCATCGTCTCCAGTCATCTCCAGgtactcttttgcttccgtttgattcaaaatcaagaaagcgatagacagagattgcaggaattttgagt---tattggaaggttgatacatattaatcttctta
 ||||| |  || ||||||||||||||  |||| ||||||||||| || || ||||| |||| ||| ||||| |||||||| |||||||| |||||||| |||  | ||   |||   |   |||       | | |  |||  |     ||  ||         |||   |  | |||  |||| ||  ||  |        
TCTCGCCAAAGAGTTCTTTGCTTTGCCGCCGGACGAGAAGCTTCGTTTTGATATGTCCGGTGCCAAAAAGGGTGGATTCATTGTCTCCAGCCATCTCCAAgtaaacattattttcgcctcatttcttttcttacagaaagatgtattttaataacaaaggggaaaagtggatggtagaaatttgagacgaatggaatgat---

upper sequence: Vv18s0001g14310.t01 (Vitis vinifera), 5'ss of exon 1
lower sequence: GLYMA01G37120.1 (Glycine max), 5'ss of exon 1
CCTCGCTAGGGAATTCTTTGCTTTGCCTGCGGAAGAGAAGCTTCGGTTCGACATGTCTGGTGGCAAGAAGGGAGGATTCATCGTCTCCAGTCATCTCCAGgtactcttttgcttccgtttgat-tcaaaatcaagaaagcgatagacagagattgcaggaattttgagttattggaaggttgatacatattaatcttctta
 ||||| |   ||||||| ||||||||  | |||||||||||||| || |||||| | ||||||||||||||||| ||| | |||||||| || || || |||   | || |         || | |    || |  | ||||      | ||  ||  | |||    |  ||     | |   |   |  |   || || 
TCTCGCCAAACAATTCTTCGCTTTGCCACCCGAAGAGAAGCTTCGCTTTGACATGACCGGTGGCAAGAAGGGAGGTTTCTTAGTCTCCAGCCACCTTCAAgtaaattatttcccaaaccctatattatgcacatgtgatcgatgtttctacataacataactttactttctttaatttgatttcatccacaaggtttttt-

upper sequence: Vv18s0001g14310.t01 (Vitis vinifera), 5'ss of exon 1
lower sequence: GLYMA02G05450.2 (Glycine max), 5'ss of exon 1
CCTCGCTAGGGAATTCTTTGCTTTGCCTGCGGAAGAGAAGCTTCGGTTCGACATGTCTGGTGGCAAGAAGGGAGGATTCATCGTCTCCAGTCATCTCCAGgtactcttttgcttccgtttgattcaaaatcaagaaa---gcgatagacagagattgcaggaattttga-gttattggaaggttgatacatattaatcttctta
 ||||| |  || ||||||||||||||  |||| ||||||||||| || || ||||| || | ||| ||||| |||||||| |||||||| |||||||| |||  | ||   |      |  | ||   | |         | | | | | | |    | || |||| | ||||  | |||   |||| | | |  |    |  
TCTCGCCAAAGAGTTCTTTGCTTTGCCACCGGACGAGAAGCTTCGTTTTGATATGTCCGGCGCCAAAAAGGGTGGATTCATTGTCTCCAGCCATCTCCAAgtaaacattaattcttcaatattacatgtttattttctttacaaaaaataaaaaagagaagatttttaaagttacagaaaga--gatatagaatgcttactt--

upper sequence: Vv18s0001g14310.t01 (Vitis vinifera), 5'ss of exon 1
lower sequence: GLYMA16G23880.1 (Glycine max), 5'ss of exon 1
CCTCGCTAGGGAATTCTTTGCTTTGCCTGCGGAAGAGAAGCTTCGGTTCGACATGTCTGGTGGCAAGAAGGGAGGATTCATCGTCTCCAGTCATCTCCAGgtactcttttgcttccgtttgattcaaaatcaagaaagcgatagacagagattgc-aggaattttgagttattgga--aggttgatacatattaatcttctta-------------------------------------
 || || |  || ||||||   |||||   ||| || ||| |||| || || ||||| |||||||| | ||||||||||| |||||| ||||||||||  |||    |||     |   || ||     ||     |    |  ||| |  ||   || | |||| | || ||        | |||    ||| ||| |   |                                     
TCTTGCCAAAGAGTTCTTTATCTTGCCACTGGACGAAAAGATTCGCTTTGATATGTCCGGTGGCAAAAGGGGAGGATTCAACGTCTCTAGTCATCTCCGAgtaaatatttttcatcacatgtttatttttctttgcaaaatttcacatatttttttagcagttttcaatttttatgttgaatcgatttggatttatcattcaagtaactaactccgtggatgatttttgggacatgacag

upper sequence: Vv18s0001g14310.t01 (Vitis vinifera), 5'ss of exon 1
lower sequence: AT3G51240.1 (Arabidopsis thaliana), 5'ss of exon 1
CCTCGCTAGGGAATTCTTTGCTTTGCCTGCGGAAGAGAAGCTTCGGTTCGACATGTCTGGTGGCAAGAAGGGAGGATTCATCGTCTCCAGTCATCTCCAGgta----ctcttttgcttccgtttgattcaaaatcaagaaagcgatagacagagattgcaggaattttgagttattggaaggttgatacatattaatcttctta
 |||||| | || ||||||||||| ||| ||||||| ||||| || ||||||||||| ||||| || || ||||||||||||||||| ||||| |||||||||    |       |   | | |   | |||  |   |    | |  |        |    |    | | | |||  |   |  |||||              
TCTCGCTCGTGACTTCTTTGCTTTACCTCCGGAAGACAAGCTCCGTTTCGACATGTCCGGTGGTAAAAAAGGAGGATTCATCGTCTCTAGTCACCTCCAGgtaaaagccacaccacaatcttctaggttaaatacgtaattatgttttaatcttgccgttaaagacataa-taattatactataaatacag-------------

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|349810441|gb|FQ401887.1|FQ401887
EST:     ACATGTCTGGTGGCAAGAAGGGAGGATTCATCGTCTCCAGTCATCTCCAG                         GGAGAAGCAGTGCAAGATTGGCGTGAGATAGTGACATACTTCTCATACCCA
genomic: ACATGTCTGGTGGCAAGAAGGGAGGATTCATCGTCTCCAGTCATCTCCAGgtactctttt ... ctgctttcagGGAGAAGCAGTGCAAGATTGGCGTGAGATAGTGACATACTTCTCATACCCA
EST: gi|30297957|gb|CB974751.1|CB974751
EST:     ACATGTCTGGTGGCAAGAAGGGAGGATTCATCGTCTCCAGTCATCTCCAG                         GGAGAAGCAGTGCAAGATTGGCGTGAGATAGTGACATACTTCTCATACCCA
genomic: ACATGTCTGGTGGCAAGAAGGGAGGATTCATCGTCTCCAGTCATCTCCAGgtactctttt ... ctgctttcagGGAGAAGCAGTGCAAGATTGGCGTGAGATAGTGACATACTTCTCATACCCA
EST: gi|352791198|gb|FQ480070.1|FQ480070
EST:     ACATGTCTGGTGGCGAGAAGGGAGGATTCATCGTCTCCAGTCATCTCCAG                         GGAGAAGCAGTGCAAGATTGGCGTGAGATAGTGACATACTTCTCATACCCA
genomic: ACATGTCTGGTGGCAAGAAGGGAGGATTCATCGTCTCCAGTCATCTCCAGgtactctttt ... ctgctttcagGGAGAAGCAGTGCAAGATTGGCGTGAGATAGTGACATACTTCTCATACCCA
EST: gi|351048823|gb|FQ449691.1|FQ449691
EST:     ACATGTCTGGTGGCAAGAAGGGAGGATTCATCGTCTCCAGTCATCTCCAG                         GGAGAAGCAGTGCAAGATTGGCGTGAGATAGTGACATACTTCTCATACCCA
genomic: ACATGTCTGGTGGCAAGAAGGGAGGATTCATCGTCTCCAGTCATCTCCAGgtactctttt ... ctgctttcagGGAGAAGCAGTGCAAGATTGGCGTGAGATAGTGACATACTTCTCATACCCA
EST: gi|229418671|gb|GO652908.1|GO652908
EST:     ACATGTCTGGTGGCAAGAAGGGAGGATTCATCGTCTCCAGTCATCTCCAG                         GGAGAAGCAGTGCAAGATTGGCGTGAGATAGTGACATACTTCTCATACCCA
genomic: ACATGTCTGGTGGCAAGAAGGGAGGATTCATCGTCTCCAGTCATCTCCAGgtactctttt ... ctgctttcagGGAGAAGCAGTGCAAGATTGGCGTGAGATAGTGACATACTTCTCATACCCA
EST: gi|352786766|gb|FQ481141.1|FQ481141
EST:     ACATGTCTGGTGGCAAGAAGGGAGGATTCATCGTCTCCAGTCATCTCCAG                         GGAGAAGCAGTGCAAGATTGGCGTGAGATAGTGACATACTTCTCATACCCA
genomic: ACATGTCTGGTGGCAAGAAGGGAGGATTCATCGTCTCCAGTCATCTCCAGgtactctttt ... ctgctttcagGGAGAAGCAGTGCAAGATTGGCGTGAGATAGTGACATACTTCTCATACCCA
EST: gi|351048008|gb|FQ441180.1|FQ441180
EST:     ACATGTCTGGTGGCAAGAAGGGAGGATTCATCGTCTCCAGTCATCTCCAG                         GGAGAAGCAGTGCAAGATTGGCGTGAGATAGTGACATACTTCTCATACCCA
genomic: ACATGTCTGGTGGCAAGAAGGGAGGATTCATCGTCTCCAGTCATCTCCAGgtactctttt ... ctgctttcagGGAGAAGCAGTGCAAGATTGGCGTGAGATAGTGACATACTTCTCATACCCA
EST: gi|352777066|gb|FQ474373.1|FQ474373
EST:     ACATGTCTGGTGGCAAGAAGGGAGGATTCATCGTCTCCAGTCATCTCCAG                         GGAGAAGCAGTGCAAGATTGGCGTGAGATAGTGACATACTTCTCATACCCA
genomic: ACATGTCTGGTGGCAAGAAGGGAGGATTCATCGTCTCCAGTCATCTCCAGgtactctttt ... ctgctttcagGGAGAAGCAGTGCAAGATTGGCGTGAGATAGTGACATACTTCTCATACCCA
EST: gi|349832924|gb|FQ423046.1|FQ423046
EST:     ACATGTCTGGTGGCAAGAAGGGAGGATTCATCGTCTCCAGTCATCTCCAG                         GGAGAAGCAGTGCAAGATTGGCGTGAGATAGTGACATACTTCTCATACCCA
genomic: ACATGTCTGGTGGCAAGAAGGGAGGATTCATCGTCTCCAGTCATCTCCAGgtactctttt ... ctgctttcagGGAGAAGCAGTGCAAGATTGGCGTGAGATAGTGACATACTTCTCATACCCA
EST: gi|349809781|gb|FQ398406.1|FQ398406
EST:     ACATGTCTGGTGGCAAGAAGGGAGGATTCATCGTCTCCAGTCATCTCCAG                         GGAGAAGCAGTGCAAGATTGGCGTGAGATAGTGACATACTTCTCATACCCG
genomic: ACATGTCTGGTGGCAAGAAGGGAGGATTCATCGTCTCCAGTCATCTCCAGgtactctttt ... ctgctttcagGGAGAAGCAGTGCAAGATTGGCGTGAGATAGTGACATACTTCTCATACCCA
EST: gi|349821042|gb|FQ404295.1|FQ404295
EST:     ACATGTCTGGTGGCAAGAAGGGAGGATTCATCGTCTCCAGTCATCTCCAG                         GGAGAAGCAGTGCAAGATTGGCGTGAGATAGTGACATACTTCTCATACCCA
genomic: ACATGTCTGGTGGCAAGAAGGGAGGATTCATCGTCTCCAGTCATCTCCAGgtactctttt ... ctgctttcagGGAGAAGCAGTGCAAGATTGGCGTGAGATAGTGACATACTTCTCATACCCA
EST: gi|349811212|gb|FQ406200.1|FQ406200
EST:     ACATGTCTGGTGGCAAGAAGGGAGGATTCATCGTCTCCAGTCATCTCCAG                         GGAGAAGCAGTGCAAGATTGGCGTGAGATAGTGACATACTTCTCATACCCA
genomic: ACATGTCTGGTGGCAAGAAGGGAGGATTCATCGTCTCCAGTCATCTCCAGgtactctttt ... ctgctttcagGGAGAAGCAGTGCAAGATTGGCGTGAGATAGTGACATACTTCTCATACCCA
EST: gi|351035825|gb|FQ463670.1|FQ463670
EST:     ACATGTCTGGTGGCAAGAAGGGAGGATTCATCGTCTCCAGTCATCTCCAG                         GGAGAAGCAGTGCAAGATTGGCGTGAGATAGTGACATACTTCTCATACCCA
genomic: ACATGTCTGGTGGCAAGAAGGGAGGATTCATCGTCTCCAGTCATCTCCAGgtactctttt ... ctgctttcagGGAGAAGCAGTGCAAGATTGGCGTGAGATAGTGACATACTTCTCATACCCA
EST: gi|349817425|gb|FQ405429.1|FQ405429
EST:     ACATGTCTGGTGGCAAGAAGGGAGGATTCATCGTCTCCAGTCATCTCCAG                         GGAGAAGCAGTGCAAGATTGGCGTGAGATAGTGACATACTTCTCATACCCG
genomic: ACATGTCTGGTGGCAAGAAGGGAGGATTCATCGTCTCCAGTCATCTCCAGgtactctttt ... ctgctttcagGGAGAAGCAGTGCAAGATTGGCGTGAGATAGTGACATACTTCTCATACCCA
EST: gi|352763831|gb|FQ473534.1|FQ473534
EST:     ACATGTCTGGTGGCAAGAAGGGAGGATTCATCGTCTCCAGTCATCTCCAG                         GGAGAAGCAGTGCAAGATTGGCGTGAGATAGTGACATACTTCTCATACCCA
genomic: ACATGTCTGGTGGCAAGAAGGGAGGATTCATCGTCTCCAGTCATCTCCAGgtactctttt ... ctgctttcagGGAGAAGCAGTGCAAGATTGGCGTGAGATAGTGACATACTTCTCATACCCA
EST: gi|352785752|gb|FQ475755.1|FQ475755
EST:     ACATGTCTGGTGGCAAGAAGGGAGGATTCATCGTCTCCAGTCATCTCCAG                         GGAGAAGCAGTGCAAGATTGGCGTGAGATAGTGACATACTTCTCATACCCA
genomic: ACATGTCTGGTGGCAAGAAGGGAGGATTCATCGTCTCCAGTCATCTCCAGgtactctttt ... ctgctttcagGGAGAAGCAGTGCAAGATTGGCGTGAGATAGTGACATACTTCTCATACCCA
EST: gi|351029953|gb|FQ430695.1|FQ430695
EST:     ACATGTCTGGTGGCAAGAAGGGAGGATTCATCGTCTCCAGTCATCTCCAG                         GGAGAAGCAGTGCAAGATTGGCGTGAGATAGTGACATACTTCTCATACCCA
genomic: ACATGTCTGGTGGCAAGAAGGGAGGATTCATCGTCTCCAGTCATCTCCAGgtactctttt ... ctgctttcagGGAGAAGCAGTGCAAGATTGGCGTGAGATAGTGACATACTTCTCATACCCA
EST: gi|351048573|gb|FQ448847.1|FQ448847
EST:     ACATGTCTGGTGGCGAGAAGGGAGGATTCATCGTCTCCAGTCATCTCCAG                         GGAGAAGCAGTGCAAGATTGGCGTGAGATAGTGACATACTTCTCATACCCA
genomic: ACATGTCTGGTGGCAAGAAGGGAGGATTCATCGTCTCCAGTCATCTCCAGgtactctttt ... ctgctttcagGGAGAAGCAGTGCAAGATTGGCGTGAGATAGTGACATACTTCTCATACCCA
EST: gi|351055810|gb|FQ452275.1|FQ452275
EST:     ACATGTCTGGTGGCAAGAAGGGAGGATTCATCGTCTCCAGTCATCTCCAG                         GGAGAAGCAGTGCAAGATTGGCGTGAGATAGTGACATACTTCTCATACCCA
genomic: ACATGTCTGGTGGCAAGAAGGGAGGATTCATCGTCTCCAGTCATCTCCAGgtactctttt ... ctgctttcagGGAGAAGCAGTGCAAGATTGGCGTGAGATAGTGACATACTTCTCATACCCA
EST: gi|110685387|gb|EE062062.1|EE062062
EST:     ACATGTCTGGTGGCAAGAAGGGAGGATTCATCGTCTCCAGTCATCTCCAG                         GGAGAAGCAGTGCAAGATTGGCGTGAGATAGTGACATACTTCTCATACCCA
genomic: ACATGTCTGGTGGCAAGAAGGGAGGATTCATCGTCTCCAGTCATCTCCAGgtactctttt ... ctgctttcagGGAGAAGCAGTGCAAGATTGGCGTGAGATAGTGACATACTTCTCATACCCA
EST: gi|349824648|gb|FQ413315.1|FQ413315
EST:     ACATGTCTGGTGGCAAGAAGGGAGGATTCATCGTCTCCAGTCATCTCCAG                         GGAGAAGCAGTGCAAGATTGGCGTGAGATAGTGACATACTTCTCATACCCG
genomic: ACATGTCTGGTGGCAAGAAGGGAGGATTCATCGTCTCCAGTCATCTCCAGgtactctttt ... ctgctttcagGGAGAAGCAGTGCAAGATTGGCGTGAGATAGTGACATACTTCTCATACCCA
EST: gi|352777849|gb|FQ466902.1|FQ466902
EST:     ACATGTCTGGTGGCAAGAAGGGAGGATTCATCGTCTCCAGTCATCTCCAG                         GGAGAAGCAGTGCAAGATTGGCGTGAGATAGTGACATACTTCTCATACCCA
genomic: ACATGTCTGGTGGCAAGAAGGGAGGATTCATCGTCTCCAGTCATCTCCAGgtactctttt ... ctgctttcagGGAGAAGCAGTGCAAGATTGGCGTGAGATAGTGACATACTTCTCATACCCA
EST: gi|33403430|gb|CF209057.1|CF209057
EST:     ACATGTCTGGTGGCAAGAAGGGAAGATTCATCGTCTCCAGTCATCTCCAG                         GGAGAAGCAGTGCAAGATTGGCGTGAGATAGTGACATACTTCTCATACCCA
genomic: ACATGTCTGGTGGCAAGAAGGGAGGATTCATCGTCTCCAGTCATCTCCAGgtactctttt ... ctgctttcagGGAGAAGCAGTGCAAGATTGGCGTGAGATAGTGACATACTTCTCATACCCA
EST: gi|349810128|gb|FQ401574.1|FQ401574
EST:     ACATGTCTGGTGGCAAGAAGGGAGGATTCATCGTCTCCAGTCATCTCCAG                         GGAGAAGCAGTGCAAGATTGGCGTGAGATAGTGACATACTTCTCATACCCG
genomic: ACATGTCTGGTGGCAAGAAGGGAGGATTCATCGTCTCCAGTCATCTCCAGgtactctttt ... ctgctttcagGGAGAAGCAGTGCAAGATTGGCGTGAGATAGTGACATACTTCTCATACCCA
EST: gi|110397889|gb|EC963858.1|EC963858
EST:     ACATGTCTGGTGGCAAGAAGGGAGGATTCATCGTCTCCAGTCATCTCCAG                         GGAGAAGCAGTGCAAGATTGGCGTGAGATAGTGACATACTTCTCATACCCA
genomic: ACATGTCTGGTGGCAAGAAGGGAGGATTCATCGTCTCCAGTCATCTCCAGgtactctttt ... ctgctttcagGGAGAAGCAGTGCAAGATTGGCGTGAGATAGTGACATACTTCTCATACCCA
EST: gi|33408229|gb|CF213856.1|CF213856
EST:     ACATGTCTGGTGGCAAGAAGGGAGGATTCATCGTCTCCAGTCATCTCCAG                         GGAGAAGCAGTGCAAGATTGGCGTGAGATAGTGACATACTTCTCATACCCA
genomic: ACATGTCTGGTGGCAAGAAGGGAGGATTCATCGTCTCCAGTCATCTCCAGgtactctttt ... ctgctttcagGGAGAAGCAGTGCAAGATTGGCGTGAGATAGTGACATACTTCTCATACCCA
EST: gi|349807362|gb|FQ401354.1|FQ401354
EST:     ACATGTCTGGTGGCAAGAAGGGAGGATTCATCGTCTCCAGTCATCTCCAG                         GGAGAAGCAGTGCAAGATTGGCGTGAGATAGTGACATACTTCTCATACCCA
genomic: ACATGTCTGGTGGCAAGAAGGGAGGATTCATCGTCTCCAGTCATCTCCAGgtactctttt ... ctgctttcagGGAGAAGCAGTGCAAGATTGGCGTGAGATAGTGACATACTTCTCATACCCA
EST: gi|351053300|gb|FQ459168.1|FQ459168
EST:     ACATGTCTGGTGGCAAGAAGGGAGGATTCATCGTCTCCAGTCATCTCCAG                         GGAGAAGCAGTGCAAGATTGGCGTGAGATAGTGACATACTTCTCATACCCA
genomic: ACATGTCTGGTGGCAAGAAGGGAGGATTCATCGTCTCCAGTCATCTCCAGgtactctttt ... ctgctttcagGGAGAAGCAGTGCAAGATTGGCGTGAGATAGTGACATACTTCTCATACCCA
EST: gi|26257024|gb|CA808087.1|CA808087
EST:     ACATGTCTGGTGGCAAGAAGGGAGGATTCATCGTCTCCAGTCATCTCCAG                         GGAGAAGCAGTGCAAGATTGGCGTGAGATAGTGACATACTTCTCATACCCA
genomic: ACATGTCTGGTGGCAAGAAGGGAGGATTCATCGTCTCCAGTCATCTCCAGgtactctttt ... ctgctttcagGGAGAAGCAGTGCAAGATTGGCGTGAGATAGTGACATACTTCTCATACCCA
EST: gi|352777731|gb|FQ466784.1|FQ466784
EST:     ACATGTCTGGTGGCAAGAAGGGAGGATTCATCGTCTCCAGTCATCTCCAG                         GGAGAAGCAGTGCAAGATTGGCGTGAGATAGTGACATACTTCTCATACCCA
genomic: ACATGTCTGGTGGCAAGAAGGGAGGATTCATCGTCTCCAGTCATCTCCAGgtactctttt ... ctgctttcagGGAGAAGCAGTGCAAGATTGGCGTGAGATAGTGACATACTTCTCATACCCA
EST: gi|71860491|gb|DT009546.1|DT009546
EST:     ACATGTCTGGTGGCAAGAAGGGAGGATTCATCGTCTCCAGTCATCTCCAG                         GGAGAAGCAGTGCAAGATTGGCGTGAGATAGTGACATACTTCTCGTACCCA
genomic: ACATGTCTGGTGGCAAGAAGGGAGGATTCATCGTCTCCAGTCATCTCCAGgtactctttt ... ctgctttcagGGAGAAGCAGTGCAAGATTGGCGTGAGATAGTGACATACTTCTCATACCCA
EST: gi|349819005|gb|FQ411700.1|FQ411700
EST:     ACATGTCTGGTGGCAAGAAGGGAGGATTCATCGTCTCCAGTCATCTCCAG                         GGAGAAGCGGTGCAAGATTGGCGTGAGATAGTGACATACTTCTCATACCCG
genomic: ACATGTCTGGTGGCAAGAAGGGAGGATTCATCGTCTCCAGTCATCTCCAGgtactctttt ... ctgctttcagGGAGAAGCAGTGCAAGATTGGCGTGAGATAGTGACATACTTCTCATACCCA
EST: gi|349810941|gb|FQ405929.1|FQ405929
EST:     ACATGTCTGGTGGCAAGAAGGGAGGATTCATCGTCTCCAGTCATCTCCAG                         GGAGAAGCAGTGCAAGATTGGCGTGAGATAGTGACATACTTCTCATACCCA
genomic: ACATGTCTGGTGGCAAGAAGGGAGGATTCATCGTCTCCAGTCATCTCCAGgtactctttt ... ctgctttcagGGAGAAGCAGTGCAAGATTGGCGTGAGATAGTGACATACTTCTCATACCCA
EST: gi|110723497|gb|EE100879.1|EE100879
EST:     ACATGTCTGGTGGCAAGAAGGGAGGATTCATCGTCTCCAGTCATCTCCAG                         GGAGAAGCAGTGCAAGATTGGCGTGAGATAGTGACATACTTCTCATACCCA
genomic: ACATGTCTGGTGGCAAGAAGGGAGGATTCATCGTCTCCAGTCATCTCCAGgtactctttt ... ctgctttcagGGAGAAGCAGTGCAAGATTGGCGTGAGATAGTGACATACTTCTCATACCCA
EST: gi|351036471|gb|FQ457184.1|FQ457184
EST:     ACATGTCTGGTGGCAAGAAGGGAGGATTCATCGTCTCCAGTCATCTCCAG                         GGAGAAGCAGTGCAAGATTGGCGTGAGATAGTGACATACTTCTCATACCCA
genomic: ACATGTCTGGTGGCAAGAAGGGAGGATTCATCGTCTCCAGTCATCTCCAGgtactctttt ... ctgctttcagGGAGAAGCAGTGCAAGATTGGCGTGAGATAGTGACATACTTCTCATACCCA
EST: gi|26257808|gb|CA808871.1|CA808871
EST:     ACATGTCTGGTGGCAAGAAGGGAGGATTCATCGTCTCCAGTCATCTCCAG                         AGAGAAGCAGTGCAAGATTGGCGTGAGATAGTGACATACTTCTCATACCCA
genomic: ACATGTCTGGTGGCAAGAAGGGAGGATTCATCGTCTCCAGTCATCTCCAGgtactctttt ... ctgctttcagGGAGAAGCAGTGCAAGATTGGCGTGAGATAGTGACATACTTCTCATACCCA
EST: gi|352773531|gb|FQ472313.1|FQ472313
EST:     ACATGTCTGGTGGCAAGAAGGGAGGATTCATCGTCTCCAGTCATCTCCAG                         GGAGAAGCAGTGCAAGATTGGCGTGAGATAGTGACATACTTCTCATACCCA
genomic: ACATGTCTGGTGGCAAGAAGGGAGGATTCATCGTCTCCAGTCATCTCCAGgtactctttt ... ctgctttcagGGAGAAGCAGTGCAAGATTGGCGTGAGATAGTGACATACTTCTCATACCCA
EST: gi|349811742|gb|FQ409739.1|FQ409739
EST:     ACATGTCTGGTGGCAAGAAGGGAGGATTCATCGTCTCCAGTCATCTCCAG                         GGAGAAGCAGTGCAAGATTGGCGTGAGATAGTGACATACTTCTCATACCCG
genomic: ACATGTCTGGTGGCAAGAAGGGAGGATTCATCGTCTCCAGTCATCTCCAGgtactctttt ... ctgctttcagGGAGAAGCAGTGCAAGATTGGCGTGAGATAGTGACATACTTCTCATACCCA
EST: gi|351053122|gb|FQ455579.1|FQ455579
EST:     ACATGTCTGGTGGCAAGAAGGGAGGATTCATCGTCTCCAGTCATCTCCAG                         GGAGAAGCAGTGCAAGATTGGCGTGAGATAGTGACATACTTCTCATACCCA
genomic: ACATGTCTGGTGGCAAGAAGGGAGGATTCATCGTCTCCAGTCATCTCCAGgtactctttt ... ctgctttcagGGAGAAGCAGTGCAAGATTGGCGTGAGATAGTGACATACTTCTCATACCCA
EST: gi|33409742|gb|CF215369.1|CF215369
EST:     ACATGTCTGGTGGCAAGAAGGGAGGATTCATCGTCTCCAGTCATCTCCAG                         GGAGAAGCAGTGCAAGATTGGCGTGAGATAGTGACATACTTCTCATACCCA
genomic: ACATGTCTGGTGGCAAGAAGGGAGGATTCATCGTCTCCAGTCATCTCCAGgtactctttt ... ctgctttcagGGAGAAGCAGTGCAAGATTGGCGTGAGATAGTGACATACTTCTCATACCCA
EST: gi|351053374|gb|FQ455710.1|FQ455710
EST:     ACATGTCTGGTGGCAAGAAGGGAGGATTCATCGTCTCCAGTCATCTCCAG                         GGAGAAGCAGTGCAAGATTGGCGTGAGATAGTGACATACTTCTCATACCCA
genomic: ACATGTCTGGTGGCAAGAAGGGAGGATTCATCGTCTCCAGTCATCTCCAGgtactctttt ... ctgctttcagGGAGAAGCAGTGCAAGATTGGCGTGAGATAGTGACATACTTCTCATACCCA
EST: gi|349814407|gb|FQ398847.1|FQ398847
EST:     ACATGTCTGGTGGCAAGAAGGGAGGATTCATCGTCTCCAGTCATCTCCAG                         GGAGAAGCAGTGCAAGATTGGCGTGAGATAGTGACATACTTCTCATACCCG
genomic: ACATGTCTGGTGGCAAGAAGGGAGGATTCATCGTCTCCAGTCATCTCCAGgtactctttt ... ctgctttcagGGAGAAGCAGTGCAAGATTGGCGTGAGATAGTGACATACTTCTCATACCCA
EST: gi|349812623|gb|FQ409782.1|FQ409782
EST:     ACATGTCTGGTGGCAAGAAGGGAGGATTCATCGTCTCCAGTCATCTCCAG                         GGAGAAGCAGTGCAAGATTGGCGTGAGATAGTGACATACTTCTCATACCCA
genomic: ACATGTCTGGTGGCAAGAAGGGAGGATTCATCGTCTCCAGTCATCTCCAGgtactctttt ... ctgctttcagGGAGAAGCAGTGCAAGATTGGCGTGAGATAGTGACATACTTCTCATACCCA
EST: gi|349810092|gb|FQ401538.1|FQ401538
EST:     ACATGTCTGGTGGCAAGAAGGGAGGATTCATCGTCTCCAGTCATCTCCAG                         GGAGAAGCAGTGCAAGATTGGCGTGAGATAGTGACATACTTCTCATACCCG
genomic: ACATGTCTGGTGGCAAGAAGGGAGGATTCATCGTCTCCAGTCATCTCCAGgtactctttt ... ctgctttcagGGAGAAGCAGTGCAAGATTGGCGTGAGATAGTGACATACTTCTCATACCCA
EST: gi|30251588|gb|CB969321.1|CB969321
EST:     ACATGTCTGGTGGCAAGAAGGGAGGATTCATCGTCTCCAGTCATCTCCAG                         GGAGAAGCAGTGCAAGATTGGCGTGAGATAGTGACATACTTCTCATACCCA
genomic: ACATGTCTGGTGGCAAGAAGGGAGGATTCATCGTCTCCAGTCATCTCCAGgtactctttt ... ctgctttcagGGAGAAGCAGTGCAAGATTGGCGTGAGATAGTGACATACTTCTCATACCCA
EST: gi|110708363|gb|EE085820.1|EE085820
EST:     ACATGTCTGGTGGCAAGAAGGGAGGATTCATCGTCTCCAGTCATCTCCAG                         GGAGAAGCAGTGCAAGATTGGCGTGAGATAGTGACATACTTCTCATACCCA
genomic: ACATGTCTGGTGGCAAGAAGGGAGGATTCATCGTCTCCAGTCATCTCCAGgtactctttt ... ctgctttcagGGAGAAGCAGTGCAAGATTGGCGTGAGATAGTGACATACTTCTCATACCCA
EST: gi|352795507|gb|FQ480095.1|FQ480095
EST:     ACATGTCTGGTGGCAAGAAGGGAGGATTCATCGTCTCCAGTCATCTCCAG                         GGAGAAGCAGTGCAAGATTGGCGTGAGATAGTGACATACTTCTCATGCCCA
genomic: ACATGTCTGGTGGCAAGAAGGGAGGATTCATCGTCTCCAGTCATCTCCAGgtactctttt ... ctgctttcagGGAGAAGCAGTGCAAGATTGGCGTGAGATAGTGACATACTTCTCATACCCA
EST: gi|110381272|gb|EC946595.1|EC946595
EST:     ACATGTCTGGTGGCAAGAAGGGAGGATTCATCGTCTCCAGTCATCTCCAG                         GGAGAAGCAGTGCAAGATTGGCGTGAGATAGTGACATACTTCTCATACCCA
genomic: ACATGTCTGGTGGCAAGAAGGGAGGATTCATCGTCTCCAGTCATCTCCAGgtactctttt ... ctgctttcagGGAGAAGCAGTGCAAGATTGGCGTGAGATAGTGACATACTTCTCATACCCA
EST: gi|110702718|gb|EE078932.1|EE078932
EST:     ACATGTCTGGTGGCAAGAAGGGAGGATTCATCGTCTCCAGTCATCTCCAG                         GGAGAAGCAGTGCAAGATTGGCGTGAGATAGTGACATACTTCTCATACCCA
genomic: ACATGTCTGGTGGCAAGAAGGGAGGATTCATCGTCTCCAGTCATCTCCAGgtactctttt ... ctgctttcagGGAGAAGCAGTGCAAGATTGGCGTGAGATAGTGACATACTTCTCATACCCA
EST: gi|351015100|gb|FQ444389.1|FQ444389
EST:     ACATGTCTGGTGGCAAGAAGGGAGGATTCATCGTCTCCAGTCATCTCCAG                         GGAGAAGCAGTGCAAGATTGGCGTGAGATAGTGACATACTTCTCATACCCA
genomic: ACATGTCTGGTGGCAAGAAGGGAGGATTCATCGTCTCCAGTCATCTCCAGgtactctttt ... ctgctttcagGGAGAAGCAGTGCAAGATTGGCGTGAGATAGTGACATACTTCTCATACCCA
EST: gi|110685441|gb|EE062165.1|EE062165
EST:     ACATGTCTGGTGGCAAGAAGGGAGGATTCATCGTCTCCAGTCATCTCCAG                         GGAGAAGCAGTGCAAGATTGGCGTGAGATAGTGACATACTTCTCATACCCA
genomic: ACATGTCTGGTGGCAAGAAGGGAGGATTCATCGTCTCCAGTCATCTCCAGgtactctttt ... ctgctttcagGGAGAAGCAGTGCAAGATTGGCGTGAGATAGTGACATACTTCTCATACCCA
EST: gi|349810113|gb|FQ401559.1|FQ401559
EST:     ACATGTCTGGTGGCAAGAAGGGAGGATTCATCGCCTCCAGTCATCTCCAG                         GGAGAAGCAGTGCAAGATTGGCGTGAGATAGTGACATACTTCTCATACCCA
genomic: ACATGTCTGGTGGCAAGAAGGGAGGATTCATCGTCTCCAGTCATCTCCAGgtactctttt ... ctgctttcagGGAGAAGCAGTGCAAGATTGGCGTGAGATAGTGACATACTTCTCATACCCA
EST: gi|351047387|gb|FQ451899.1|FQ451899
EST:     ACATGTCTGGTGGCAAGAAGGGAGGATTCATCGTCTCCAGTCATCTCCAG                         GGAGAAGCAGTGCAAGATTGGCGTGAGATAGTGACATACTTCTCATACCCA
genomic: ACATGTCTGGTGGCAAGAAGGGAGGATTCATCGTCTCCAGTCATCTCCAGgtactctttt ... ctgctttcagGGAGAAGCAGTGCAAGATTGGCGTGAGATAGTGACATACTTCTCATACCCA
EST: gi|352782373|gb|FQ470276.1|FQ470276
EST:     ACATGTCTGGTGGCAAGAAGGGAGGATTCATCGTCTCCAGTCATCTCCAG                         GGAGAAGCAGTGCAAGATTGGCGTGAGATAGTGACATACTTCTCATACCCA
genomic: ACATGTCTGGTGGCAAGAAGGGAGGATTCATCGTCTCCAGTCATCTCCAGgtactctttt ... ctgctttcagGGAGAAGCAGTGCAAGATTGGCGTGAGATAGTGACATACTTCTCATACCCA
EST: gi|30126562|gb|CB911901.1|CB911901
EST:     ACATGTCTGGTGGCAAGAAGGGAGGATTCATCGTCTCCAGTCATCTCCAG                         GGAGAAGCAGTGCAAGATTGGCGTGAGATAGTGACATACTTCTCATACCCA
genomic: ACATGTCTGGTGGCAAGAAGGGAGGATTCATCGTCTCCAGTCATCTCCAGgtactctttt ... ctgctttcagGGAGAAGCAGTGCAAGATTGGCGTGAGATAGTGACATACTTCTCATACCCA
EST: gi|351044693|gb|FQ443224.1|FQ443224
EST:     ACATGTCTGGTGGCAAGAAGGGAGGATTCATCGTCTCCAGTCATCTCCAG                         GGAGAAGCAGTGCAAGATTGGCGTGAGATAGTGACATACTTCTCATACCCA
genomic: ACATGTCTGGTGGCAAGAAGGGAGGATTCATCGTCTCCAGTCATCTCCAGgtactctttt ... ctgctttcagGGAGAAGCAGTGCAAGATTGGCGTGAGATAGTGACATACTTCTCATACCCA
EST: gi|33408910|gb|CF214537.1|CF214537
EST:     ACATGTCTGGTGGCAAGAAGGGAGGATTCATCGTCTCCAGTCATCTCCAG                         GGAGAAGCAGTGCAAGATTGGCGTGAGATAGTGACATACTTCTCATACCCA
genomic: ACATGTCTGGTGGCAAGAAGGGAGGATTCATCGTCTCCAGTCATCTCCAGgtactctttt ... ctgctttcagGGAGAAGCAGTGCAAGATTGGCGTGAGATAGTGACATACTTCTCATACCCA
EST: gi|110733199|gb|EE109182.1|EE109182
EST:     ACATGTCTGGTGGCAAGAAGGGAGGATTCATCGTCTCCAGTCATCTCCAG                         GGAGAAGCAGTGCAAGATTGGCGTGAGATAGTGACATACTTCTCATACCCA
genomic: ACATGTCTGGTGGCAAGAAGGGAGGATTCATCGTCTCCAGTCATCTCCAGgtactctttt ... ctgctttcagGGAGAAGCAGTGCAAGATTGGCGTGAGATAGTGACATACTTCTCATACCCA
EST: gi|349812874|gb|FQ410516.1|FQ410516
EST:     ACATGTCTGGTGGCAAGAAGGGAGGATTCATCGTCTCCAGTCATCTCCAG                         GGAGAAGCAGTGCAAGATTGGCGTGAGATAGTGACATACTTCTCATACCCG
genomic: ACATGTCTGGTGGCAAGAAGGGAGGATTCATCGTCTCCAGTCATCTCCAGgtactctttt ... ctgctttcagGGAGAAGCAGTGCAAGATTGGCGTGAGATAGTGACATACTTCTCATACCCA
EST: gi|349811446|gb|FQ409442.1|FQ409442
EST:     ACATGTCTGGTGGCAAGAAGGGAGGATTCATCGCCTCCAGTCATCTCCAG                         GGAGAAGCAGTGCAAGATTGGCGTGAGATAGTGACATACTTCTCATACCCA
genomic: ACATGTCTGGTGGCAAGAAGGGAGGATTCATCGTCTCCAGTCATCTCCAGgtactctttt ... ctgctttcagGGAGAAGCAGTGCAAGATTGGCGTGAGATAGTGACATACTTCTCATACCCA
EST: gi|349828339|gb|FQ416292.1|FQ416292
EST:     ACATGTCTGGTGGCAAGAAGGGAGGATTCATCGTCTCCAGTCATCTCCAG                         GGAGAAGCAGTGCAAGATTGGCGTGAGATAGTGACATACTTCTCATACCCA
genomic: ACATGTCTGGTGGCAAGAAGGGAGGATTCATCGTCTCCAGTCATCTCCAGgtactctttt ... ctgctttcagGGAGAAGCAGTGCAAGATTGGCGTGAGATAGTGACATACTTCTCATACCCA
EST: gi|110688128|gb|EE066328.1|EE066328
EST:     ACATGTCTGGTGGCAAGAAGGGAGGATTCATCGTCTCCAGTCATCTCCAG                         GGAGAAGCAGTGCAAGATTGGCGTGAGATAGTGACATACTTCTCGTACCCA
genomic: ACATGTCTGGTGGCAAGAAGGGAGGATTCATCGTCTCCAGTCATCTCCAGgtactctttt ... ctgctttcagGGAGAAGCAGTGCAAGATTGGCGTGAGATAGTGACATACTTCTCATACCCA
EST: gi|33405405|gb|CF211032.1|CF211032
EST:     ACATGTCTGGTGGCAAGAAGGGAGGATTCATCGTCTCCAGTCATCTCCAG                         GGAGAAGCAGTGCAAGATTGGCGTGAGATAGTGACATACTTCTCATACCCA
genomic: ACATGTCTGGTGGCAAGAAGGGAGGATTCATCGTCTCCAGTCATCTCCAGgtactctttt ... ctgctttcagGGAGAAGCAGTGCAAGATTGGCGTGAGATAGTGACATACTTCTCATACCCA
EST: gi|351048456|gb|FQ448730.1|FQ448730
EST:     ACATGTCTGGTGGCAAGAAGGGAGGATTCATCGTCTCCAGTCATCTCCAG                         GGAGAAGCAGTGCAAGATTGGCGTGAGATAGTGACATACTTCTCATACCCA
genomic: ACATGTCTGGTGGCAAGAAGGGAGGATTCATCGTCTCCAGTCATCTCCAGgtactctttt ... ctgctttcagGGAGAAGCAGTGCAAGATTGGCGTGAGATAGTGACATACTTCTCATACCCA
EST: gi|110428138|gb|EC994600.1|EC994600
EST:     GGATTCATCGTCTCCAGTCATCTCCAG                         GGAGAAGCAGTGCAAGATTGGCGTGAGATAGTGACATACTTCTCATACCCA
genomic: GGATTCATCGTCTCCAGTCATCTCCAGgtactctttt ... ctgctttcagGGAGAAGCAGTGCAAGATTGGCGTGAGATAGTGACATACTTCTCATACCCA
EST: gi|26263831|gb|CA814894.1|CA814894
EST:     ACATGTCTGGTGGCAAGAAGGGAGGATTCATCGTCTCCAGTCATCTCCAG                         GGAGAAGCAGTGCAAGATTGGCGTGAGATAGTGACATACTTCTCATACCCA
genomic: ACATGTCTGGTGGCAAGAAGGGAGGATTCATCGTCTCCAGTCATCTCCAGgtactctttt ... ctgctttcagGGAGAAGCAGTGCAAGATTGGCGTGAGATAGTGACATACTTCTCATACCCA
EST: gi|30251094|gb|CB968827.1|CB968827
EST:     ACATGTCTGGTGGCAAGAAGGGAGGATTCATCGTCTCCAGTCATCTCCAG                         GGAGAAGCAGTGCAAGATTGGCGTGAGATAGTGACATACTTCTCATACCCA
genomic: ACATGTCTGGTGGCAAGAAGGGAGGATTCATCGTCTCCAGTCATCTCCAGgtactctttt ... ctgctttcagGGAGAAGCAGTGCAAGATTGGCGTGAGATAGTGACATACTTCTCATACCCA
EST: gi|71863421|gb|DT012476.1|DT012476
EST:     ACATGTCTGGTGGCAAGAAGGGAGGATTCATCGTCTCCAGTCATCTCCAG                         GGAGAAGCAGTGCAAGATTGGCGTGAGATAGTGACATACTTCTCGTACCCA
genomic: ACATGTCTGGTGGCAAGAAGGGAGGATTCATCGTCTCCAGTCATCTCCAGgtactctttt ... ctgctttcagGGAGAAGCAGTGCAAGATTGGCGTGAGATAGTGACATACTTCTCATACCCA
EST: gi|351013367|gb|FQ425072.1|FQ425072
EST:     ACATGTCTGGTGGCAAGAAGGGAGGATTCATCGTCTCCAGTCATCTCCAG                         GGAGAAGCAGTGCAAGATTGGCGTGAGATAGTGACATACTTCTCATACCCA
genomic: ACATGTCTGGTGGCAAGAAGGGAGGATTCATCGTCTCCAGTCATCTCCAGgtactctttt ... ctgctttcagGGAGAAGCAGTGCAAGATTGGCGTGAGATAGTGACATACTTCTCATACCCA
EST: gi|351053800|gb|FQ441566.1|FQ441566
EST:     ACATGTCTGGTGGCAAGAAGGGAGGATTCATCGTCTCCAGTCATCTCCAG                         GGAGAAGCAGTGCAAGATTGGCGTGAGATAGTGACATACTTCTCATACCCA
genomic: ACATGTCTGGTGGCAAGAAGGGAGGATTCATCGTCTCCAGTCATCTCCAGgtactctttt ... ctgctttcagGGAGAAGCAGTGCAAGATTGGCGTGAGATAGTGACATACTTCTCATACCCA
EST: gi|349810410|gb|FQ401856.1|FQ401856
EST:     ACATGTCTGGTGGCAAGAAGGGAGGATTCATCGCCTCCAGTCATCTCCAG                         GGAGAAGCAGTGCAAGATTGGCGTGAGATAGTGACATACTTCTCATACCCA
genomic: ACATGTCTGGTGGCAAGAAGGGAGGATTCATCGTCTCCAGTCATCTCCAGgtactctttt ... ctgctttcagGGAGAAGCAGTGCAAGATTGGCGTGAGATAGTGACATACTTCTCATACCCA
EST: gi|349812534|gb|FQ407153.1|FQ407153
EST:     ACATGTCTGGTGGCAAGAAGGGAGGATTCATCGTCTCCAGTCATCTCCAG                         GGAGAAGCAGTGCAAGATTGGCGTGAGATAGTGACATACTTCTCATACCCG
genomic: ACATGTCTGGTGGCAAGAAGGGAGGATTCATCGTCTCCAGTCATCTCCAGgtactctttt ... ctgctttcagGGAGAAGCAGTGCAAGATTGGCGTGAGATAGTGACATACTTCTCATACCCA
EST: gi|349812313|gb|FQ406334.1|FQ406334
EST:     ACATGTCTGGTGGCAAGAAGGGAGGATTCATCGTCTCCAGTCATCTCCAG                         GGAGAAGCAGTGCAAGATTGGCGTGAGATAGTGACATACTTCTCATACCCG
genomic: ACATGTCTGGTGGCAAGAAGGGAGGATTCATCGTCTCCAGTCATCTCCAGgtactctttt ... ctgctttcagGGAGAAGCAGTGCAAGATTGGCGTGAGATAGTGACATACTTCTCATACCCA
EST: gi|351048936|gb|FQ449779.1|FQ449779
EST:     ACATGTCTGGTGGCAAGAAGGGAGGATTCATCGTCTCCAGTCATCTCCAG                         GGAGAAGCAGTGCAAGATTGGCGTGAGATAGTGACATACTTCTCATACCCA
genomic: ACATGTCTGGTGGCAAGAAGGGAGGATTCATCGTCTCCAGTCATCTCCAGgtactctttt ... ctgctttcagGGAGAAGCAGTGCAAGATTGGCGTGAGATAGTGACATACTTCTCATACCCA
EST: gi|351042243|gb|FQ442710.1|FQ442710
EST:     ACATGTCTGGTGGCAAGAAGGGAGGATTCATCGTCTCCAGTCATCTCCAG                         GGAGAAGCAGTGCAAGATTGGCGTGAGATAGTGACATACTTCTCATACCCA
genomic: ACATGTCTGGTGGCAAGAAGGGAGGATTCATCGTCTCCAGTCATCTCCAGgtactctttt ... ctgctttcagGGAGAAGCAGTGCAAGATTGGCGTGAGATAGTGACATACTTCTCATACCCA
EST: gi|349815760|gb|FQ400916.1|FQ400916
EST:     ACATGTCTGGTGGCAAGAAGGGAGGATTCATCGTCTCCAGTCATCTCCAG                         GGAGAAGCAGTGCAAGATTGGCGTGAGATAGTGACATACTTCTCATACCCG
genomic: ACATGTCTGGTGGCAAGAAGGGAGGATTCATCGTCTCCAGTCATCTCCAGgtactctttt ... ctgctttcagGGAGAAGCAGTGCAAGATTGGCGTGAGATAGTGACATACTTCTCATACCCA
EST: gi|294965875|gb|GW837358.1|GW837358
EST:     ACATGTCTGGTGGCAAGAAGGGAGGATTCATCGTCTCCAGTCATCTCCAG                         GGAGAAGCAGTGCAAGATTGGCGTGAGATAGTGACATACTTCTCATACCCA
genomic: ACATGTCTGGTGGCAAGAAGGGAGGATTCATCGTCTCCAGTCATCTCCAGgtactctttt ... ctgctttcagGGAGAAGCAGTGCAAGATTGGCGTGAGATAGTGACATACTTCTCATACCCA
EST: gi|351044783|gb|FQ449037.1|FQ449037
EST:     ACATGTCTGGTGGCAAGAAGGGAGGATTCATCGTCTCCAGTCATCTCCAG                         GGAGAAGCAGTGCAAGATTGGCGTGAGATAGTGACATACTTCTCATACCCA
genomic: ACATGTCTGGTGGCAAGAAGGGAGGATTCATCGTCTCCAGTCATCTCCAGgtactctttt ... ctgctttcagGGAGAAGCAGTGCAAGATTGGCGTGAGATAGTGACATACTTCTCATACCCA

Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
CCTCGCTAGGGAATTCTTTGCTTTGCCTGCGGAAGAGAAGCTTCGGTTCGACATGTCTGGTGGCAAGAAGGGAGGATTCATCGTCTCCAGTCATCTCCAGgtactcttttgcttccgtttgattcaaaatcaagaaagcgatagacagagattgcaggaattttgagttattggaaggttgatacatattaatcttctta

- - - - - - - - - - - - - - - - - - - - - - - - - - - -  TGGTGG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  GAGGAT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - caagaaa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -gacagaga
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - caggaat