Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|30135813|gb|CB921151.1|CB921151EST: CAGCGATCTCATGTCCTTCATTTCTGCGGTGCCCGAGAACAAGAGGCCTG CTCTGTTTCAGTCTCTTTTGTTCGAAGCCTGTGGGCGCACTGTGAATCCAG
genomic: CAGCGATCTCATGTCCTTCATTTCTGCGGTGCCCGAGAACAAGAGGCCTGgtatgctttt ... tttctttcagCTCTGTTTCAGTCTCTTTTGTTCGAAGCCTGTGGGCGCACTGTGAATCCAG
EST:
gi|110401866|gb|EC968490.1|EC968490EST: CAGCGATCTCATGTCCTTCATTTCTGCGGTGCCCGAGAACAAGAGGCCTG CTCTGTTTCAGTCTCTTTTGTTCGAAGCCTGTGGGCGCACTGTGAATCCAG
genomic: CAGCGATCTCATGTCCTTCATTTCTGCGGTGCCCGAGAACAAGAGGCCTGgtatgctttt ... tttctttcagCTCTGTTTCAGTCTCTTTTGTTCGAAGCCTGTGGGCGCACTGTGAATCCAG
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
CCTGAGGCTCAAGGCTACGCCACCTTGTTCGTCTCTAAGTTCTTCGGCCGCAGCGATCTCATGTCCTTCATTTCTGCGGTGCCCGAGAACAAGAGGCCTGgtatgctttttcaatctattcttttctcctttatcgtttttggaaaatgttttataaagatgctttctttttgttttttctttccctttgttgttgttcatatgcgcggtttctttcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAGG