Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|32247810|gb|CD713629.1|CD713629EST: GCCGAAATTGATCTCTACAAATTCGATCCCTGGCAGCTTCCTG AGATGGCCTTGTACGGAGAGAAAGAGTGGTACTTCTTTTCGCCGAGAGATC
genomic: GCCGAAATTGATCTCTACAAATTCGATCCCTGGCAGCTTCCTGgtaattatta ... atttgaacagAGATGGCCTTGTACGGAGAGAAAGAGTGGTACTTCTTTTCGCCGAGAGATC
EST:
gi|32247866|gb|CD713685.1|CD713685EST: GCCGAAATTGATCTCTACAAATTCGATCCCTGGCAGCTTCCTG AGATGGCCTTGTACGGAGAGAAAGAGTGGTACTTCTTTTCGCCGAGAGATC
genomic: GCCGAAATTGATCTCTACAAATTCGATCCCTGGCAGCTTCCTGgtaattatta ... atttgaacagAGATGGCCTTGTACGGAGAGAAAGAGTGGTACTTCTTTTCGCCGAGAGATC
EST:
gi|110390288|gb|EC955190.1|EC955190EST: GATCATTGCCGAAATTGATCTCTACAAATTCGATCCCTGGCAGCTTCCTG AGATGGCCTTGTACGGAGAGAAAGAGTGGTACTTCTTTTCGCCGAGAGATC
genomic: GATCATTGCCGAAATTGATCTCTACAAATTCGATCCCTGGCAGCTTCCTGgtaattatta ... atttgaacagAGATGGCCTTGTACGGAGAGAAAGAGTGGTACTTCTTTTCGCCGAGAGATC
EST:
gi|32248569|gb|CD714388.1|CD714388EST: GCCGAAATTGATCTCTACAAATTCGATCCCTGGCAGCTTCCTG AGATGGCCTTGTACGGAGAGAAAGAGTGGTACTTCTTTTCGCCGAGAGATC
genomic: GCCGAAATTGATCTCTACAAATTCGATCCCTGGCAGCTTCCTGgtaattatta ... atttgaacagAGATGGCCTTGTACGGAGAGAAAGAGTGGTACTTCTTTTCGCCGAGAGATC
EST:
gi|71858247|gb|DT007302.1|DT007302EST: GATCATTGCCGAAATTGATCTCTACAAATTCGATCCCTGGCAGCTTCCTG AGATGGCCTTGTACGGAGAGAAAGAGTGGTACTTCTTTTCGCCGAGAGATC
genomic: GATCATTGCCGAAATTGATCTCTACAAATTCGATCCCTGGCAGCTTCCTGgtaattatta ... atttgaacagAGATGGCCTTGTACGGAGAGAAAGAGTGGTACTTCTTTTCGCCGAGAGATC
EST:
gi|110371825|gb|EC935949.1|EC935949EST: GATCATTGCCGAAATTGATCTCTACAAATTCGATCCCTGGCAGCTTCCTG AGATGGCCTTGTACGGAGAGAAAGAGTGGTACTTCTTTTCGCCGAGAGATC
genomic: GATCATTGCCGAAATTGATCTCTACAAATTCGATCCCTGGCAGCTTCCTGgtaattatta ... atttgaacagAGATGGCCTTGTACGGAGAGAAAGAGTGGTACTTCTTTTCGCCGAGAGATC
EST:
gi|161717713|gb|FC065938.1|FC065938EST: GATCATTGCCGAAATTGATCTCTACAAATTCGATCCCTGGCAGCTTCCTG AGATGGCCTTGTACGGAGAGAAAGAGTGGTACTTCTTTTCGCCGAGAGATC
genomic: GATCATTGCCGAAATTGATCTCTACAAATTCGATCCCTGGCAGCTTCCTGgtaattatta ... atttgaacagAGATGGCCTTGTACGGAGAGAAAGAGTGGTACTTCTTTTCGCCGAGAGATC
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
GTGATGCACTATCTGTGCCGTAAATGTGCATCGCAATCGATCGCCGTGCCGATCATTGCCGAAATTGATCTCTACAAATTCGATCCCTGGCAGCTTCCTGgtaattattattattttcatttttttgttatttttttctgaactcccaaaatttggatttttatttaagggggatttggtgatttgaacag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCAGCT